| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6537 |
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| Symbol | |
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| ID | 5153227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6819288 |
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| End bp | 6820691 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640561236 |
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| Product | hypothetical protein |
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| Protein accession | YP_001242351 |
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| Protein GI | 148257766 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.866176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCGT CCGATCCAGT CAGGAGCGCT CACGATGGTC GTCAACGAAG GTTGCTCATC
GTGTTGGCGC TGGGATTTGT TGCCTTTGGC GCCGCTGCGG CCGCCCTCTT CTACGTCTTA
CAGCCCGAGA CCCTGCGGAT CGCCGTTGGA CCGGCAGGGA GCGACGACTA TCAGGTGGTC
CAGGCGATGG CCGACGCCTT CAGCGAGGAA AGCAGGACAG TCAGGCTCTC CCCGCTCACG
ACCGGGGGAG CGGCTGAGTC GCTCGCCCTG CTGTCCGCCG ACAAAACCGA TCTGGCGGTC
GGCCGCGGCG ACCTCGGCAT GCCGCCCGAC GCGCAAACAT TGGCCATTCT GCGGAAGAAT
TACGTTGTCC TGTGGTCGCC CTCCGGGCGA CGCAGCAACG AGACCAAGAA GAAGGCGAGC
GGTAAGATCG GAGACATCGC GCAACTGACG GGTCGCAAGG TCGGCATCAT CGGGAGGACC
GGAGCAAACG TCGCCGTTCT CCGAACCATT CTGGAAGGCT CCGGCGTGCC GCCGGACAAG
GTGACCACGG CTCAATTCGG GACGGACGAG ATCGAAAAGC TTGCGCAGGA CCCGACCCTG
GATGCGTATC TCGCCGTTGG TCCGCTTGAC AGCAAAATCA CGGCGGACGC CATCGCCGCG
ACTGCCCGAG TGCGTGGCGC TCCTACCTTT CTTCCGATCG AAGCATCTGA GGCCATTGCT
CTGAAGCACG CGCGCTACGA GGCCGAGGAA ATTCCGGCCA GCGTCTTCAA CGCGCGACCG
GCCTGGCCAG AGGACAAGGT CGACACGATC AGCGTCAACC ACCTGATCCT GGCCAGGAAG
GAACTGTCCG AAGCCAAGGC GGCAGCTTTC TATCGGCAGC TGTTCGCTGT CCGCGACACG
ATCACGCAAG GCGTCGCCGG CGCGTCCCAC ATCATGAAGC CCGACACGGA GAAGGAGACT
GACCCCTCCG TGCATCGGGG CGCCGCGGCG GTGATCAACG GCACGGAGCG AACCTTTCTG
GACAAGTACA GCGACTACTT CTGGTTCGCC CTGCTTGTTC TGTCCGGCAT CGGTTCGGCA
GCCGCCTGGC TGCGTCGCTT TCTGAACCGG GACGAACCGG ACGACGACAA CAGCTGTCGC
AATCGCATTC TCGCGGCCGT GTCGGAGGTG CGCAATGCCG GGTCGGAAGA CGATCTGCTG
ACACGACAGC GCGAAGTCGA CGCGATCATC GGCGAGACCC TCAAATCCTA CGACGATGGA
GTCATCGAAC AGGAGGATCT GGCCGCATTC GGTCTGGTCC TCGAACTATT CCATCATGCC
ATCGCCGAAA GGCGAGCGAC GCTGCAGAGC GGTCCCGCCG ATCCAACATG GACGACGGGC
CCAACCCTCG CCTCGCGGCG CTAG
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| Protein sequence | MSPSDPVRSA HDGRQRRLLI VLALGFVAFG AAAAALFYVL QPETLRIAVG PAGSDDYQVV
QAMADAFSEE SRTVRLSPLT TGGAAESLAL LSADKTDLAV GRGDLGMPPD AQTLAILRKN
YVVLWSPSGR RSNETKKKAS GKIGDIAQLT GRKVGIIGRT GANVAVLRTI LEGSGVPPDK
VTTAQFGTDE IEKLAQDPTL DAYLAVGPLD SKITADAIAA TARVRGAPTF LPIEASEAIA
LKHARYEAEE IPASVFNARP AWPEDKVDTI SVNHLILARK ELSEAKAAAF YRQLFAVRDT
ITQGVAGASH IMKPDTEKET DPSVHRGAAA VINGTERTFL DKYSDYFWFA LLVLSGIGSA
AAWLRRFLNR DEPDDDNSCR NRILAAVSEV RNAGSEDDLL TRQREVDAII GETLKSYDDG
VIEQEDLAAF GLVLELFHHA IAERRATLQS GPADPTWTTG PTLASRR
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