| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6534 |
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| Symbol | |
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| ID | 5153225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6816389 |
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| End bp | 6817756 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561234 |
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| Product | putative reverse transcriptasematurase of intron |
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| Protein accession | YP_001242349 |
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| Protein GI | 148257764 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.339692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCGG AAGATCAGAG CAATCTGAAC CCTCGCCTCG GACCGAGGGG TGAAGCCCCG
CGTGCCGGCG CCGGGGAGGC CGAAGCTCGT GCGGCGTTGA CCTGTCTCGA ACGCCCGGCG
GTCGTGGGAC CGTCGATGGA AAGGATCGTC GCACGTGAGA ACCTGAAGAA GGCATTGGAC
CGAGTGAAGC GCAACAAGGG GGCGGCGGGT GTCGACGGGA TGACCGTGGA CGATCTGCCG
ACCTACCTGA AGGCGAACTG GCTCACGATC CGGGCTCAGC TGCTCGACGG CACCTACAAA
CCGCAGGCGG TGCGGCGTGT CGAGATCCCG AAGGCATCGG GTGGCGTTCG GCTGCTCGGC
ATCCCGACGG TTGTCGACCG CTTCATCCAG CAGGCGGTGT TGCAGGTGTT GCAGGGCGAA
TGGGACCGGA CGTTCTCCGA CGCGAGCTAC GGCTTCAGGC CAGGCCGCTC GGCGCATCAG
GCGGTGACGA AGGCGCAGGC GTACATTGCG TCCCGGCACC GCATCGTGGT GGATATCGAC
CTGGAGAAGT TCTTCGACCG GGTCAACCAC GACATCCTGA TGGGGCTGGT TGCCAAACGG
GTCGCTGACA AGCGTCTTCT GAAGCTGATC CGCGGCTTCT TGACTGCGGG TGTGCTGGAG
GGAGGGCTGG TCAGCCCGAC GGAGGAAGGC GCGCCGCAAG GCGGGCCGCT CTCGCCGCTG
CTGTCGAACC TGATGCTGGA CGTGCTGGAC AAGGAGCTGG AGAGGCGAGG TCATCGCTTC
GTGCGCTATG CCGACGACTG CAACATCTAT GTGCGCAGTC GAAAGGCGGG CGAGCGGGTG
ATGGCGAGCA TCGAGACGTT CCTGGAACGG TGCCTCAAGC TCAAGGTGAA CAGGGCCAAG
AGCGCGGTCG CCAGACCGAA CCACCGCAAG TTCCTGGGCT TCAGCTTTAC CCAGGGGAGA
AAGCCGCGTC GGCGCATCGC GCCCGAGGCG ATCGCCCGCT GCAAGGCCAG AGTTCGGGAA
CTGACGGGGC GACAATCTGG TCGAAGCCTC GCGCAGATCA TCGAGAAGCT GTCGCTGTAC
CTGAAGGGAT GGCGCGGCTA CTTCGGGTTC TGCGAGACAC CGTCGGTGTT GCGCAAGCTG
GATGAGTGGA TCAGGCGGCG GTTGCGCGCC GTCGTCTGGA CCCAATGGAA GCAGGGTCGT
ACTCGCTTCG ACGAGCTGCA ACGCTGCGGC GTTGGCCGGG AGCTGGCGCT CAAAACCGCC
GGCAACCCAC GTGGCCCTTG GCGGCTGGCG AACAGTGCCG GGCTGACCAT GGCTCTGCCA
AACGTCTTCT TCGCCTCACG CGGATTGCCC TACCTCGCAC CCCGCTGA
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| Protein sequence | MRPEDQSNLN PRLGPRGEAP RAGAGEAEAR AALTCLERPA VVGPSMERIV ARENLKKALD
RVKRNKGAAG VDGMTVDDLP TYLKANWLTI RAQLLDGTYK PQAVRRVEIP KASGGVRLLG
IPTVVDRFIQ QAVLQVLQGE WDRTFSDASY GFRPGRSAHQ AVTKAQAYIA SRHRIVVDID
LEKFFDRVNH DILMGLVAKR VADKRLLKLI RGFLTAGVLE GGLVSPTEEG APQGGPLSPL
LSNLMLDVLD KELERRGHRF VRYADDCNIY VRSRKAGERV MASIETFLER CLKLKVNRAK
SAVARPNHRK FLGFSFTQGR KPRRRIAPEA IARCKARVRE LTGRQSGRSL AQIIEKLSLY
LKGWRGYFGF CETPSVLRKL DEWIRRRLRA VVWTQWKQGR TRFDELQRCG VGRELALKTA
GNPRGPWRLA NSAGLTMALP NVFFASRGLP YLAPR
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