Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6530 |
Symbol | |
ID | 5150554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6812176 |
End bp | 6812724 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640561229 |
Product | RNA polymerase ECF-type sigma factor |
Protein accession | YP_001242345 |
Protein GI | 148257760 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGC CGGCAGAGCT GGTCTGGTTG CTTGCCGCAG TCGCCAAGGG GGATGAGGCC GCGTTCGAGC GCCTCTACGC GGCAACGCGC GCGAAACTCT ATGGCGTCGT GCTCCGTATC TTGCACCGAC AGGACCTCGC CGAGGAGGTC GTCCAGGAGA CCTACGTCAA GGTTTGGAAT AATGCCGCCC AGTTCAACCC GGCGGTGTCT TCCCCGATCA CCTGGATGGC CGCCATCGCT CGCAACCGGG CCATCGATCT GGTGCGCAAG CGGGGCGAGC TGTCTTTGGA GGACGAGCCG TCCGCGTTCG AGGTCGCTGC CGAGACGCCG GATCCGCTGG CGCGGCGCGA AATGTCGGAG GAGCTGAAGC GGCTATTGGA ATGTGTCGGC CGGCTCGAGC CGGACCGTCA GAAGCTCGTG CTGCTGGCCT ATTATAACGG CTGGAGCCGT GAGCAACTGG CGACCAAGTT CGAGGCGCCG GTGAATACGG TCAAGACCTG GCTGCGGCGG AGCATGATGG ACATTCGCCA ATGCCTCGGT CTCGGTTGA
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Protein sequence | MLTPAELVWL LAAVAKGDEA AFERLYAATR AKLYGVVLRI LHRQDLAEEV VQETYVKVWN NAAQFNPAVS SPITWMAAIA RNRAIDLVRK RGELSLEDEP SAFEVAAETP DPLARREMSE ELKRLLECVG RLEPDRQKLV LLAYYNGWSR EQLATKFEAP VNTVKTWLRR SMMDIRQCLG LG
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