| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6487 |
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| Symbol | kdgD |
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| ID | 5156242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6760658 |
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| End bp | 6761599 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561186 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_001242302 |
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| Protein GI | 148257717 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.603765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA TGACCCCCCA GGAAATGGCT GCGAAAATCG GCAGCGGCCT GCTCTCCTTC
CCCGTGACGC CGTTCAAGGC CGACTATTCG TTCGACGAGG CCACCTATCG CGCCAACATG
GACTGGCTGT GCGGCTACGA GGTCGCCGGC CTGTTCGCCG CCGGCGGCAC CGGCGAGTTC
TTCTCGCTGA CCCCGGCCGA AGTGCCTGAG GTGGTGCGGG TCGCCGTCGA CGAGACCCGC
GGCCGCGTGC CTGTGCTGGC CGGCACCGGC TACGGCACCG CCATCGCGCG CGAGATCGCC
ATCGGTGCGG AGAAGGCCGG CGCGGACGGC CTGCTGCTGC TGCCGCCCTA TCTGACCCAT
GCCGAGCAGG ACGGCCTCGC CGCCCATGTC GAGGCGGTCT GCAAGTCCGT GAAGATCGGC
GTCATCGTCT ACAATCGCGA CAACGCGATC CTGCAGCCAG ACACTCTGGC GCGGCTGTGC
GAGCGCTGCC CGAACCTGGT CGGCTACAAG GACGGCATTG GCGACATCGA GCTGATGACC
CGGGTCTACA GCAAGATGGG CGACCGCCTG ACCTATATCG GCGGCCTGCC GACGGCGGAA
ACCTTCGCGC TGCCCTATCT CGACATGGGC GTGACGACCT ACTCGTCGGC CGTGTTCAAC
TTTGTGCCGG AGTTCGCGAC GAATTTCTAT GCCGCAGTGC GCAAGCGCGA CCATGCCACC
ATCCATGCCG GATTGAAGGA TTTCATTTTG CCGCTGATCG CGATACGCAA CCGCAAGAAG
GGTTACGCGG TCTCGATCAT CAAGGCCGGC ATGAAGGTCA TCGGCCGCGA TTCCGGCCCG
GTCCGCCTGC CGCTGACCGA TCTCACCGAA ACCGAGATGG CGGAGCTGAC CGCGCTGGTG
AAGGCGCTGC CGGCAGCGGC GGTGAGCCAG GCGGCGGAGT AA
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| Protein sequence | MSKMTPQEMA AKIGSGLLSF PVTPFKADYS FDEATYRANM DWLCGYEVAG LFAAGGTGEF
FSLTPAEVPE VVRVAVDETR GRVPVLAGTG YGTAIAREIA IGAEKAGADG LLLLPPYLTH
AEQDGLAAHV EAVCKSVKIG VIVYNRDNAI LQPDTLARLC ERCPNLVGYK DGIGDIELMT
RVYSKMGDRL TYIGGLPTAE TFALPYLDMG VTTYSSAVFN FVPEFATNFY AAVRKRDHAT
IHAGLKDFIL PLIAIRNRKK GYAVSIIKAG MKVIGRDSGP VRLPLTDLTE TEMAELTALV
KALPAAAVSQ AAE
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