| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6445 |
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| Symbol | crtI |
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| ID | 5154644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6713840 |
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| End bp | 6715378 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561145 |
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| Product | phytoene dehydrogenase (phytoene desaturase) |
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| Protein accession | YP_001242261 |
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| Protein GI | 148257676 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.691802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG TCTCCACCAT CAAGGCCGCT GTTCCGGCTG CGCTCGGAGA CCGGCCGCAT
GCGGTCGTGA TCGGCTCCGG CTTCGGCGGT CTTGCTGCGG CCGTTCGGCT CGGCGCGCGC
GGCTATCGCG TCACCGTGTT CGAGCAGCTC GATGCGCCCG GCGGCCGCGC CTATGTGCAT
CGCCAGGATG GCTTCACCTT CGATGCCGGC CCGACCATCG TGACGGCGCC GTTCCTGTTC
GAGGAGCTGT GGCAGCTGTG CGGGCGGCGG ATGTCGGACG ACGTCACGCT GAACCCGATC
TCGCCCTTCT ATCGCATCCG CTTCGACGAC GGCACCGTGT TCGACTGCTC GGCCGATCCG
GCGGCGATGC GCGCCGAAGT GGCGAGGATT TCGCCCGGCG ACGTCGAGGG TTATGAGCGC
TTCATGAAGG CGAGCGAGGC GATCTTCAAG AAGGGCTTTG AGGAGCTCGG CGACGTGCCG
TTCCTGTCGC TGCTCGACAT GGCCAGGATC GCGCCGGCGA TGATCAAGCT GCAGAGCTTT
CGGTCGGTCT ATGGCCTCGT CTCGCATTAT GTTCGCGACG AGCGGCTGCG TGTCATCCTG
AGCTTTCACC CACTGCTGAT CGGCGGCAAT CCGTTCACGA CGACCTCGAT CTACTGTCTG
ATCGCCTATC TGGAGCGCCG CTGGGGCGTG CATTTCGCGA TGGGCGGCAC CGGCGCGCTG
GTCGCGGGGC TCGTCGACCT GATCGAGGGG CAGGGCGGCG AGGTGCGCTG CTCCGCGCCT
GTTGCCGAGA TCACCACCAG GGATGGCGCT GCGACCGGCG TAAAGCTCAA GTCCGGCGAG
ACCATTGCCG CCGATGTCGT CGTGTCCAAT GGCTGCGCTG CCTGGACCTA CAAGCATCTT
TTGCCCAGCA TTCCGCGCCG GCGCTGGACC GATGCGCGCA TCGATCGCGC GCGCTATTCG
ATGAGCCTGT TCGTCTGGTA TTTCGGCACG AAGCGCCGCT ATGACGATGT CGAGCATCAC
ACCATCCTGC TCGGTCCGCG TTATCGCGGC CTGCTCGACG ACATCTTCCG CCGCAAGGTG
CTGGCGGATG ATTTCAGCCT CTACCTGCAC CGGCCCACCG CGACCGATCC GTCGCTGGCG
CCCGAGGGCT GCGACGCCTT CTACGTGCTG TCGCCGGTGC CACACCAGGA GAGCGGCATC
GACTGGGCCG CTACCGCGGA GCCATTCCGC AAGCGGATCG AGACCGCGCT GAGCGAGACG
CTGCTGCCGG ATCTCGCCGG GGAGATCGTT ACGTCGCGAC TGCTGACCCC GGACGATTTC
GAGCATCGGC TGTCGTCCTA TCGCGGCGCC GCCTTCGGAC TCGAACCGGT CCTGCTGCAG
AGCGCCTGGT TCCGGCCGCA CAACAAGAGC GAAGAGGTCG AGCGCCTCTA TCTCGTCGGG
GCGGGGACGC ATCCGGGAGC CGGCCTGCCC GGCGTATTAT CCTCGGCGCG GGTGCTCGAT
GATCTCGTGC CCGCGCCACA TGAGCTGGAG CGGCGATGA
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| Protein sequence | MLDVSTIKAA VPAALGDRPH AVVIGSGFGG LAAAVRLGAR GYRVTVFEQL DAPGGRAYVH
RQDGFTFDAG PTIVTAPFLF EELWQLCGRR MSDDVTLNPI SPFYRIRFDD GTVFDCSADP
AAMRAEVARI SPGDVEGYER FMKASEAIFK KGFEELGDVP FLSLLDMARI APAMIKLQSF
RSVYGLVSHY VRDERLRVIL SFHPLLIGGN PFTTTSIYCL IAYLERRWGV HFAMGGTGAL
VAGLVDLIEG QGGEVRCSAP VAEITTRDGA ATGVKLKSGE TIAADVVVSN GCAAWTYKHL
LPSIPRRRWT DARIDRARYS MSLFVWYFGT KRRYDDVEHH TILLGPRYRG LLDDIFRRKV
LADDFSLYLH RPTATDPSLA PEGCDAFYVL SPVPHQESGI DWAATAEPFR KRIETALSET
LLPDLAGEIV TSRLLTPDDF EHRLSSYRGA AFGLEPVLLQ SAWFRPHNKS EEVERLYLVG
AGTHPGAGLP GVLSSARVLD DLVPAPHELE RR
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