Gene BBta_6402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6402 
SymbolcbbR 
ID5153622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6668952 
End bp6669872 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID640561102 
ProductLysR family transcriptional regulator 
Protein accessionYP_001242218 
Protein GI148257633 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.356896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC GCTTCTCCCG CGACCTCACC ATTCGCCAGC TTCGCGCGCT CGTCGCGGTG 
CAAAACTCTG GGTCAGTGAC CTCGGCGGCC GGCCGGTTGC ATCTCACACA ACCAGCGGTC
ACGCTGCAAA TTCGCAATCT TCAGGAGCTC GCCGGGCTGC CGCTGATCCA GCGCACCGCC
GACGGCATGA TCCTGACCGA AGCCGGGCTC AGCGTGCTGG CTCTGGCCGA GCGCGTCGAG
GCGGCGCTGC TGGATTGCGA GCAGGCCCTC GACATCCTGG CGGGCCGCAG CGGCGGCCGC
GTCGCAATCG GCGCCGTCAG CACCGCGAAA TATTTCGTGC CGTTTGCGAT TGCGGAATTT
TCGCGGCGTT TTCCCAAGAT CGACGTCACC CTGCGGATCG GCAATCGCGA CAGCCTGCGC
GAGGCCTTGC GCGGCTATGA TCTCGACATT GCCATCATGG GCCGGCCGCC CGCCGACATT
CCGGTCGACA TGCGGCCGTT CGGCCAGCAT CCGCACATCA TCATCGCCCC GGCGGGCCAT
CGCCTTGCAC GCCGCAAGCG AATTGCCGCC GAGGACCTCG CAGACGAGGT TTTCATCACG
CGTGAGCCTG GCTCCGGGAC GCGGCTGCTG ATGGAGACCT TTTTCGAGAA GAAGGGGCTG
CATCCGAAGA CCAGCATGGA GATGGACAGC AACGAGACGA TCAAGCAGGC CGTCATCGCC
GGTCTCGGCA TCGCCTTCAT CTCGCAGCAC ACCGTGTCGC ATGAGCTGAG CGAAGGGCGG
CTGGTCATCT TGCGGGTCAC CGGCCTGCCG ATCATCCGGC AATGGCATGC GGTGCGGCGC
GCCGACAAGC TGCTGCTGCC GCCGGCCCAG GCGATGCTGG ATTTCTTCGG CAAGGAGGGC
GCACGCTTCC TGCCGCGATG A
 
Protein sequence
MSRRFSRDLT IRQLRALVAV QNSGSVTSAA GRLHLTQPAV TLQIRNLQEL AGLPLIQRTA 
DGMILTEAGL SVLALAERVE AALLDCEQAL DILAGRSGGR VAIGAVSTAK YFVPFAIAEF
SRRFPKIDVT LRIGNRDSLR EALRGYDLDI AIMGRPPADI PVDMRPFGQH PHIIIAPAGH
RLARRKRIAA EDLADEVFIT REPGSGTRLL METFFEKKGL HPKTSMEMDS NETIKQAVIA
GLGIAFISQH TVSHELSEGR LVILRVTGLP IIRQWHAVRR ADKLLLPPAQ AMLDFFGKEG
ARFLPR