Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6402 |
Symbol | cbbR |
ID | 5153622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6668952 |
End bp | 6669872 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561102 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001242218 |
Protein GI | 148257633 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.356896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGC GCTTCTCCCG CGACCTCACC ATTCGCCAGC TTCGCGCGCT CGTCGCGGTG CAAAACTCTG GGTCAGTGAC CTCGGCGGCC GGCCGGTTGC ATCTCACACA ACCAGCGGTC ACGCTGCAAA TTCGCAATCT TCAGGAGCTC GCCGGGCTGC CGCTGATCCA GCGCACCGCC GACGGCATGA TCCTGACCGA AGCCGGGCTC AGCGTGCTGG CTCTGGCCGA GCGCGTCGAG GCGGCGCTGC TGGATTGCGA GCAGGCCCTC GACATCCTGG CGGGCCGCAG CGGCGGCCGC GTCGCAATCG GCGCCGTCAG CACCGCGAAA TATTTCGTGC CGTTTGCGAT TGCGGAATTT TCGCGGCGTT TTCCCAAGAT CGACGTCACC CTGCGGATCG GCAATCGCGA CAGCCTGCGC GAGGCCTTGC GCGGCTATGA TCTCGACATT GCCATCATGG GCCGGCCGCC CGCCGACATT CCGGTCGACA TGCGGCCGTT CGGCCAGCAT CCGCACATCA TCATCGCCCC GGCGGGCCAT CGCCTTGCAC GCCGCAAGCG AATTGCCGCC GAGGACCTCG CAGACGAGGT TTTCATCACG CGTGAGCCTG GCTCCGGGAC GCGGCTGCTG ATGGAGACCT TTTTCGAGAA GAAGGGGCTG CATCCGAAGA CCAGCATGGA GATGGACAGC AACGAGACGA TCAAGCAGGC CGTCATCGCC GGTCTCGGCA TCGCCTTCAT CTCGCAGCAC ACCGTGTCGC ATGAGCTGAG CGAAGGGCGG CTGGTCATCT TGCGGGTCAC CGGCCTGCCG ATCATCCGGC AATGGCATGC GGTGCGGCGC GCCGACAAGC TGCTGCTGCC GCCGGCCCAG GCGATGCTGG ATTTCTTCGG CAAGGAGGGC GCACGCTTCC TGCCGCGATG A
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Protein sequence | MSRRFSRDLT IRQLRALVAV QNSGSVTSAA GRLHLTQPAV TLQIRNLQEL AGLPLIQRTA DGMILTEAGL SVLALAERVE AALLDCEQAL DILAGRSGGR VAIGAVSTAK YFVPFAIAEF SRRFPKIDVT LRIGNRDSLR EALRGYDLDI AIMGRPPADI PVDMRPFGQH PHIIIAPAGH RLARRKRIAA EDLADEVFIT REPGSGTRLL METFFEKKGL HPKTSMEMDS NETIKQAVIA GLGIAFISQH TVSHELSEGR LVILRVTGLP IIRQWHAVRR ADKLLLPPAQ AMLDFFGKEG ARFLPR
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