Gene BBta_6400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6400 
SymbolcbbP 
ID5154110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6666863 
End bp6667738 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content59% 
IMG OID640561100 
Productphosphoribulokinase 
Protein accessionYP_001242216 
Protein GI148257631 
COG category[C] Energy production and conversion 
COG ID[COG3954] Phosphoribulokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTC GCCATCCCAT CATCTCGATC ACCGGCTCGT CGGGAGCCGG CACCACCTCG 
GTCAAGAAGA CCTTCGAGAA CATCTTCCGC CGCGAGAACG TCAAGGCCGC CTATATCGAG
GGCGATGCGT TTCACCGCTA CAACCGCGAA GAGATGCGCC GCAAGATGGT CGAGGAGGCT
GAACGCGGCA ACAAGCACTT CAGCCATTTC AGCCCGGATA CCAATCTGTT CGAGGAGCTC
GAGAAGACGT TTCGCGATTA CTCCGAGACC GGCACGGGCA TGACCCGCCA TTATGTGCAC
GACGAGGAGG AGGCGCGGCT TTATGATACG AGGCCGGGCA ATTTCACCGA GTGGAGCCGG
CTGCCTGACG ATTCCGATCT TCTGTTCTAC GAGGGCCTGC ATGGCGCCGT CGTCACCGAG
AAGGTGAACA TCGCGCAGCA TGCCGATCTG AAGATCGGCG TCGTCCCGGT GATCAACCTG
GAATGGATCC AGAAGCTGCA TCGCGACCGC GCCTCGCGCG GCTACACCAC CGAGGCCGTG
ACCGACACGA TCCTGCGGCG GATGCCGGAT TATGTGAACT ACATCATCCC GCAATTCTCG
GAGACCGACA TCAACTTCCA GCGTGTGCCG ACGGTCGATA CGTCCAATCC GTTCATCGCG
CGCTGGATCC CGACGCCGGA CGAATCGATG GTCGTGATCC GTCTCAAGAA CCCGCGCGGC
ATCGACTTCC CCTATCTGCT CTCGATGATC CAGGGCAGCT TCATGTCGCG CGCCAATTCG
ATCGTGATCC ATGGCTCGAA GCTCGATCTC GCCATGCAGC TCATTCTCAC ACCGATGATC
ATGCAACTGA TGGACCGAAA GAGGCGCACG CTATGA
 
Protein sequence
MSRRHPIISI TGSSGAGTTS VKKTFENIFR RENVKAAYIE GDAFHRYNRE EMRRKMVEEA 
ERGNKHFSHF SPDTNLFEEL EKTFRDYSET GTGMTRHYVH DEEEARLYDT RPGNFTEWSR
LPDDSDLLFY EGLHGAVVTE KVNIAQHADL KIGVVPVINL EWIQKLHRDR ASRGYTTEAV
TDTILRRMPD YVNYIIPQFS ETDINFQRVP TVDTSNPFIA RWIPTPDESM VVIRLKNPRG
IDFPYLLSMI QGSFMSRANS IVIHGSKLDL AMQLILTPMI MQLMDRKRRT L