Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6357 |
Symbol | phnD |
ID | 5153567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6621419 |
End bp | 6622132 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640561063 |
Product | putative phosphate/phosphonate ABC transporter, substrate-binding protein |
Protein accession | YP_001242179 |
Protein GI | 148257594 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.150614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.724502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGCGAAT TCCAGAAAGT CAGGCTCGTG CAAACCCTCC AGCTGGTCTC CCCGGAGAGC TGGGCGGCGA TCTCGGTGGC GATGTCGAAC GGCCATATCG ATCTCGGTTG GCTCGGTCCG TGGGGCTACG TGCTCGCCAA TCATCACTCC GGCGTTGAGG TGATCGCCAC CGCCAAGTAC CGCGGCAAGC CGATCTACCA TGCCATCATT GAAGGCCGCC CCGACCTCCC GATCAAGAAC TTCCCGCAAG ACGCCAAGGG GCTGAAGCTG TCTCTGAGCG ATCAGGGCAA CACGTCAGGC TGGCTCATTC CCTACGCGTT TTTGCTCAAG GAAGGCGTCG ACCCGTCCAG CTACTTCCAA TTGCGTGAGG GAGCGACCTT CGGCAACAAC GTGATGATGA TACAACAGGG CCTGATCGAT CTCGGCTCCG ACATGGATCG CGGCCGCTAC GGCATGATCG AAGCCGGCGA GATGGATCCG AAGAAGGTGC AGGTCTATTG GACCTCGGAC CCGCTACCGA ACGACGCAAT CTGTGTGCCG AAGGGCTTTG ATCCGGACCT CAAGGCCCGC ATTCGCGACA TCATGGTTGG GTTAAGCGAG GAAAAGGCGC AGTCGATGAT GGGCAGCGGG TATAACGGCT TCGTCCCCGC CGTTCACGCC GACTACAAGA TCATCGAGGA CGCCGGCCGG ATCACCGGCA AGCTCAAGGT CTGA
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Protein sequence | MCEFQKVRLV QTLQLVSPES WAAISVAMSN GHIDLGWLGP WGYVLANHHS GVEVIATAKY RGKPIYHAII EGRPDLPIKN FPQDAKGLKL SLSDQGNTSG WLIPYAFLLK EGVDPSSYFQ LREGATFGNN VMMIQQGLID LGSDMDRGRY GMIEAGEMDP KKVQVYWTSD PLPNDAICVP KGFDPDLKAR IRDIMVGLSE EKAQSMMGSG YNGFVPAVHA DYKIIEDAGR ITGKLKV
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