| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6262 |
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| Symbol | |
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| ID | 5150935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6502338 |
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| End bp | 6505946 |
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| Gene Length | 3609 bp |
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| Protein Length | 1202 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640560971 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001242088 |
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| Protein GI | 148257503 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0163021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.538502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCGC TGATGCGCGT CCATGACTGG TCCCGAACGC CGCTCGGCCT GCCGGAGTTC
TGGCCCCAAT CGCTGCGGAC CACCGTCAGC ACCTGCCTCG ACTGTGCGTT CCCGATCCTG
ATCTGGTGGG GACCCGAGCT CGTCATGCTC TACAACGACG AGTACCGTCC GATCCTCGGC
TCGCAGAAAC ATCCCGCCGC GCTCGGCGCT CCCGGCCGTG CGGTATGGCC CGAGATCTGG
GAGGTCATCG GCCCGATGCT GCGGCAGGTG ATCGCCCGCG GCGAGGCGAC CCGCTCGCGC
GATTTGCCGC TGTTCATGGA CCGCCACGGC TACCTCGAGG AGACCTACTT CTCGTTCTCT
TATTCGCCGA TTCGCGATGA GAGCGGCGGC GTCGGTGGGA TTTTCACGCC AGTCATCGAG
ACCACTGCCA AAGTGGTGGG CGAGCGCCGC ATGCGGACCT TGCGCGACCT GGCAGCACGC
GGGCGCGCCG ACAGCCTGCA AGAGGCTGGT CAAGGGGTCG CCGAGGTTCT TGCGGAGAAC
CGGCATGATG TCCCCTTTGC GCTGATCTAT CAGCCGAGCG AGGATGGACA CTCTGCGCGG
CTGCTCGGCG CCGCCGGTGT GCAGCCCGGC AGCAGCATGG CTCCGTGGCA GATTGATCTC
GCGGCCGCAG ACGGCTCGCC ATGGCCGATC CGCGCCGCCT TGGGCGCCGC GGCGCCGATC
CGCGTCGCGC TCGATCATGC GACCATGTCT GTCCCCGCCG GCGTCTGGCC AGAGCCGCCG
CAACTGGCGC TGGCCTTGCC GGTCGCGACC GGGCGCGAGC GCGCCACCGC GGTTCTGATC
TGCGGCGTCA ATCCGCGCCG TGCGCTCGAC GCCGAGCATC AGAGCTTCTT TGAGTTGATG
GCCACGCAGC TCGCCAGCTC GTTTGCCGAG ACGCTCGCCT ACGAAGAGGA GCGGCGTCGC
GCGAAGGCGC TCGCCGAGAT CGATCGGGCG AAGACCGAGT TCTTTGCCAA TGTCAGCCAC
GAGTTTCGCA CCCCGCTGAC GCTGATGCTG GGGCCGCTCG AGGATGTCCT GACGCGATCC
CCGGCACTCT CGCTGGAGGA TCGAGAGCGA CTGGAGGTCG CTCAGCGTAA TGCGCTGCGC
CTGCTCAAGC TGGTCAACAC GCTGTTGGAT TTCTCCCGTA TCGAGGCCGG CCGAGCGCAG
GGAGCCTATG CGCCGACCGA CCTCGCACGC TTGACTGCCG ATCTGGCCGG CGTGTTCCGC
TCGGCGGTCG AGAGCGCTGG CCTGAAGCTG ATCGTCGATT GTCCGCCATT GCCGGAGCCG
GCCTATGTCG ATCGGGAGAT GTGGGAGAAG ATTGTCCTCA ATCTGCTCTC TAACGCGTTC
AAGTTCACCT CTTCAGGCGA GATCGAGGTC AGGCTGATTG TTTCCCAAGG CAATTTCGAG
CTCAGCATCC GGGACACCGG GACCGGGATT CCGCAAGATG AGCTGCCGAA GCTGTTCGAG
CGCTTCCATC GTGTCGCGGA TGCCCGCGGC CGCACGCATG AAGGATCGGG GATCGGCCTC
GCGCTGGTGC AGGAGCTCGC AAGATTGCAT GCCGGGTCGG TCGATGTGAC GAGTTCGCTC
GGGCAGGGCA GCACGTTCAC GGTCCGCATC CCCTGCGGCA AGAGTCATCT GCCGGCCGAA
CAGATCAAGG CGGCGCCGAA CACCGGGCCG CTCGGCGCGC AGCCATTCAT CGAGGAGGCC
TTGCGCTGGC TGCCGGATGC GTCGCCCCTC GAGGCTCATG TCGTTGCCGA TGTCGTCCAG
AATGTGCCCT TGCAGGACCG CACCGGGGCT CGCGCACGCA TTCTTCTCGC CGACGACAAT
GCCGATATGC GGGACTACGT TCGCCGGCTG CTCGAAGCGC GTTACGAGGT CGAGACGGTC
GGGGACGGCG AGGCGGCGCT TGCCGCCATG GCCCGCGCCA AGCCTGATCT CGTTCTGTCG
GATGTGATGA TGCCGCGGAT CGATGGCATG CAACTGCTCG CTCGCGTGCG CGCCGATCCC
AAGGTCAGCA CCGTTCCGAT CATCCTGTTG TCCGCGCGCG CGGGCGAAGA GAGCCGCGTC
GAGGGCATGC AGGCCGGCGC GGACGATTAT CTGATCAAAC CGTTCAGCGC CAGCGAGCTC
CTCGCCCGCG TCGAGGCGCA TCTCAAGATG GCGCAGCTTC GCGCCGAGGC GACTGAAAGC
CTGCGTGCCA GCGCGGAGCT CTTTCGTGCC TTCGTGACCG CCAGCTCGGA CATCGTCTAT
CGGATGAGTC CGGACGGGAC GGAGATGCGC TATCTGCAGG GCAAGGATTT CGTTCCTCAC
ACCCTGGCTC CGAGCCAACG CTGGCTCGCG AAATACATTC ATCCCGATGA TCAGGCGCAG
ATGATGGCGG CGATCGCACG CGCGATCGAG GCGAAGAGCA TCTTCGAGCT GGAGCATCGC
ATCATACGGG CCGACGGCAC GCTGGGGTGG GCGCATTCGC GCGCCATCCC GATGCTCGAC
GGCAGCGGCG ATATCGTCGA GTGGTTCGGC ACCGCGCGTG AGATCACCGA ACAGAAGCAG
GCCGAGCATG AGCTGCGCAA GAGCGAGGAG CGCCTGCGCA GCGCAGTGGA AGTCGGGCGG
CTCGGCCTGT GGGATTGGAA CGTCACCACC GGCGAGGTCT ACTGGTCGGA TGAGCACTTC
CGCATGGAAG GCTACGGCGT CGGCGAGGTC ACGCCGAGCT ATGACGCCTG GACGGCGCGG
ATCCATCCCG CGGACCGCCC CGCGGCCGAG GCCGCGCTGC GTCAGGCGAT GCAGACGCGC
CAGGAGTTTG TCAGCGAGTT TCGCGTCGTG CATCCGGACG GAGTTATTCG CTACCTGTAT
GGACGCGGGC GCTTCTTCTA CGACGAGGCC GGGCAGCCGA TCCGCATGAC CGGCGCGATG
GTCGACATGA CGGAGCGGCG CGAATGGGAG GAACGGCAGA AGGTGCTGGT CGCCGAACTG
CAGCATCGCA CGCGCAATCT TCTGGGCGTC GTTCGCTCGA CGGCGGACAA GACCGCGCGT
GCCAGCACCG ATTTGTCCGA TTTTCGGGTC CGCTTCCGCG ATCGACTCGA GGCTTTGTCG
CGCGTCCAGG GCTTGCTGTC CCGCCTCGGG GAGCACGATC GGGTCGCCTT CGATGATCTG
ATCCGCACTG AGCTCTCGGC TGTTGCCGGC GGATCCGAGC GGATCGTGCT CGACGGACCC
GCTGGCGTTC GGCTGCGCTC ATCCACCGTG CAGATGCTCG CAATGGCGCT GCATGAGCTC
GCGACCAATG CCGTCAAATA TGGTGCGCTC GCGCAACCTG CGGGCCGGCT TTCGGTGCAA
TGGTCGCTGG AGCGCAACGG CACCGATGGA AAACCGTGGC TCAATATTGC GTGGCGGGAA
AGCGGCGTCG ACATGCCGCC ACGTGGCGCC GGACCCGTCG GCACGGGACA GGGGCGCGAA
CTGATCGAGC AGGCGTTGCC CTATCAGCTC AGCGCGAGAA CCTCCTACAC ATTCGCGTCC
GACGGGGTCT GCTGCACGAT TTCGATCCCT GTTTCGCTCA GCACGCTGGA GCTCGATGAG
CATGCTTGA
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| Protein sequence | MGALMRVHDW SRTPLGLPEF WPQSLRTTVS TCLDCAFPIL IWWGPELVML YNDEYRPILG
SQKHPAALGA PGRAVWPEIW EVIGPMLRQV IARGEATRSR DLPLFMDRHG YLEETYFSFS
YSPIRDESGG VGGIFTPVIE TTAKVVGERR MRTLRDLAAR GRADSLQEAG QGVAEVLAEN
RHDVPFALIY QPSEDGHSAR LLGAAGVQPG SSMAPWQIDL AAADGSPWPI RAALGAAAPI
RVALDHATMS VPAGVWPEPP QLALALPVAT GRERATAVLI CGVNPRRALD AEHQSFFELM
ATQLASSFAE TLAYEEERRR AKALAEIDRA KTEFFANVSH EFRTPLTLML GPLEDVLTRS
PALSLEDRER LEVAQRNALR LLKLVNTLLD FSRIEAGRAQ GAYAPTDLAR LTADLAGVFR
SAVESAGLKL IVDCPPLPEP AYVDREMWEK IVLNLLSNAF KFTSSGEIEV RLIVSQGNFE
LSIRDTGTGI PQDELPKLFE RFHRVADARG RTHEGSGIGL ALVQELARLH AGSVDVTSSL
GQGSTFTVRI PCGKSHLPAE QIKAAPNTGP LGAQPFIEEA LRWLPDASPL EAHVVADVVQ
NVPLQDRTGA RARILLADDN ADMRDYVRRL LEARYEVETV GDGEAALAAM ARAKPDLVLS
DVMMPRIDGM QLLARVRADP KVSTVPIILL SARAGEESRV EGMQAGADDY LIKPFSASEL
LARVEAHLKM AQLRAEATES LRASAELFRA FVTASSDIVY RMSPDGTEMR YLQGKDFVPH
TLAPSQRWLA KYIHPDDQAQ MMAAIARAIE AKSIFELEHR IIRADGTLGW AHSRAIPMLD
GSGDIVEWFG TAREITEQKQ AEHELRKSEE RLRSAVEVGR LGLWDWNVTT GEVYWSDEHF
RMEGYGVGEV TPSYDAWTAR IHPADRPAAE AALRQAMQTR QEFVSEFRVV HPDGVIRYLY
GRGRFFYDEA GQPIRMTGAM VDMTERREWE ERQKVLVAEL QHRTRNLLGV VRSTADKTAR
ASTDLSDFRV RFRDRLEALS RVQGLLSRLG EHDRVAFDDL IRTELSAVAG GSERIVLDGP
AGVRLRSSTV QMLAMALHEL ATNAVKYGAL AQPAGRLSVQ WSLERNGTDG KPWLNIAWRE
SGVDMPPRGA GPVGTGQGRE LIEQALPYQL SARTSYTFAS DGVCCTISIP VSLSTLELDE
HA
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