| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6222 |
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| Symbol | thiO |
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| ID | 5150095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6469919 |
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| End bp | 6470935 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640560934 |
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| Product | thiamine biosynthesis oxidoreductase thiO |
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| Protein accession | YP_001242051 |
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| Protein GI | 148257466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.787474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA CAACCACGAC AGGCGGGGAT CGTCCCGTAT CCATCATCGG CGCGGGCATT
GCCGGCGCCT GGCAGGCGCT GTTGTTCGCG CGCGCCGGCC ACGCCGTCAC GCTGCATGAA
CGCAGCGACG CCGACCTGAT GCTCTCCACC AGTCACTGGG CCGGCGGCAT GCTGGCTCCC
TATTGCGAGA GCGAGATTTC AGAACCTGTG ATCAGCCGGC TCGGCCTCGC CTCGCTCGCG
CTGTGGCGGC GCGAGCTGCC GGAGACGCCG TTCAACGGCT CGCTGGTGAT CGCGCATGCG
CGCGACCGCG CCGATTACGA CCGTTTCGCC CGCCGCACCT CCGGCTATGA ACGCCTCGAC
GCGGCGCAGC TCGCAACGCT GGAGCCGTCG CTGGAGGGCC GCTTCCGCGA GGGGCTATTC
TATCCGACCG AAGGCCATGT CGAACCGCGC CGCGTGCTGC CGAAGCTGCA CCAGCGCATC
ATCGAGGCCG GCGGCCGCGT GCTGTTCAAC AGCAACGTCA CGGCGTCCGA TCTCGACGGT
CTCGTGATCG ACTGCCGCGG CCTCGATGCA CGCGACGCCG AGCCGGAGCT GCGCGGCGTC
AAGGGCGAGA TGATCCTGAT CGAAACCGCC GAGGTGCAGC TGGCGCGGCC GGTCCGGCTG
ATGCATCCGC GCTGGCCGCT CTATCTGATC CCGCGCGCCG ACAACCTGTT CATGCTGGGC
GCGACCTCGC TGGAGGCCGA GGACACCGGC GTGTCCCTGC GCTCGGCGCT GGAGCTGCTC
GGCGCCGCCT ATTCGGTGCA TCCGGCGTTC GGCGAGGCGC GCATCCTCGA ATTCGGCTCG
GGGCTGCGGC CGGCCTATCC GGACAATCTG CCGCGCATCA CCGTGACGAG CGAGCGTGAG
ATCCGCGTCA ACGGCCTCTA TCGCCACGGC TTCCTGATCG CGCCGGCCCT GGCGCAGGCG
ACCTTGAACT ACGTCGCGCA TGGCCAGATC GACAATGAGG TGATGCGATG CGCGTGA
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| Protein sequence | MQQTTTTGGD RPVSIIGAGI AGAWQALLFA RAGHAVTLHE RSDADLMLST SHWAGGMLAP
YCESEISEPV ISRLGLASLA LWRRELPETP FNGSLVIAHA RDRADYDRFA RRTSGYERLD
AAQLATLEPS LEGRFREGLF YPTEGHVEPR RVLPKLHQRI IEAGGRVLFN SNVTASDLDG
LVIDCRGLDA RDAEPELRGV KGEMILIETA EVQLARPVRL MHPRWPLYLI PRADNLFMLG
ATSLEAEDTG VSLRSALELL GAAYSVHPAF GEARILEFGS GLRPAYPDNL PRITVTSERE
IRVNGLYRHG FLIAPALAQA TLNYVAHGQI DNEVMRCA
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