Gene BBta_6202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6202 
SymbolmacB 
ID5156321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6445081 
End bp6447045 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content67% 
IMG OID640560913 
Productmacrolide ABC transporter ATP-binding/membrane protein 
Protein accessionYP_001242031 
Protein GI148257446 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.486155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAG AGCTGCTGAT CGACCTGCAG AATGTCGGAC GCCGCTATGC CTCCGGCGAC 
AGCACGGTGC ATGCCTTACG CGGCGTCGAC ATCCAGATCG CGCGCGGCGA GATGGTGGCG
ATCATCGGCC AGTCGGGCTC CGGCAAGTCG ACCTTGATGA ACATCCTCGG CTGCCTTGAT
CGGCCGACCT CGGGCAGCTA CCGGATCGCC GGCCGCGAGA TGAGCTCGCT CGATCCGGAC
GAGCTCGCGG CGTTGCGCCG CGAGCATTTC GGTTTCATCT TTCAGCGCTA CCATCTGCTC
GGCGAACTGA CCGCCGCGCA GAACGCCGAG GTTCCCGCCG TCTATTCAGG GCTCACGCAG
GCTGCGCGAC GCCACAAGGC CGAGGCGCTG CTGCGGCGGC TCGGCATGGG GAGCCGCATC
GATCACCGGC CAGGCCAGCT CTCGGGCGGC CAGCAGCAGC GTGTCTCGAT CGCCCGCGCG
CTGGTCAACG ATCCCGACGT CATCCTTGCC GACGAGCCGA CCGGCGCGCT CGATCGCGCC
AGCGGCGAGG AGGTGCTGCG CATCCTCGAC GAGATCAGCG CCTCCGGGCG CACGGTCATC
ATCGTCACGC ACGACGCCGG CGTCGCGCAG CGGGCGCGGC GCATCATCGA GATCCAGGAT
GGCCGCGTCA TCTCCGACCG GCTCAATTCG CGTGGCCCGA CACAGGCTCA GACCACCGCA
GCCGAAGTCC CGGCGGCCTC CGCATCGTCA TGGTGGCGCA GCTATCTCGA TCGCTTCCGG
GAAGCGGCGC GGATGGCGCT GCTCGCCATG AACGCGCACC GGATGCGCGC CTTCCTCACG
ATGCTCGGGA TCATCATCGG CGTCGCCTCC GTCGTGCTGG TGCTGGCGCT CGGCAAAGGC
TCGCAGGCGC GCGTGCTGAA GGACATCAAC CGGCTCGGCA CCAACACGCT GGAGTTCTTT
CCGGGCAAGG ATTTCGGCGA CACGCGCGCC AACAAGATCA GAACCCTGGT GCTCGCCGAC
GCCAAGGTCA TGGCAGAACA GCCCTATGTC GACGCGATCT CGCCGACGGT GTCGACCACC
AGCACCCTGC GTTTCGGCGC CATCGAGGTC AGCGCGCAGG TCTCGGGCGT CGGCGAGCAG
TATTTCCGCG TCAAGAACAC CGAGCTCGCC GAAGGCAGCT ATCTCGACGC CGACACGGTG
CGGTCCTACG CCCAGGATGC GGTGATCGAC GACAATGCGC GCAAGGCGCT GTTTCCGGAT
CCGGATGTGA GCCCGCTCGG CAGCGTGGTC CTGATCGGCA AGGTGCCCTG CCGCGTCGTC
GGCGTCACCA AGCAGCAGCA GGCCGGCTTC GGCTCCAGCT CGACGCCGAT CGTCTATCTG
CCCTACACCA CCGTGCAGGC CCGCTTCATC GGCAACCAGG TGCTGCGCAG CATCAGCGTG
CGCGTCGACG AGGCGACGCC GATGGCTGCC GCCGAGCGCG CGGCAACGGC GCTACTCACC
GCGCGCCACA ACGCCAAGGA TTTCTTTGTC CTCAACACCG ACGACATCCG CAAGACGGTC
GAGAGCACCA CGCAGGTGCT GACCCTGCTG GTCGCGGCCA TCGCCGTGAT TTCGCTCCTG
GTCGGCGGCA TCGGCGTCAT GAACATCATG CTGGTGTCGG TGTCGGAGCG CGTCGGCGAG
ATCGGCGTAC GCATGGCGGT CGGTGCCCGC CGCAGCGACA TCCTGATGCA GTTTCTGATC
GAGGCGGTGC TGGTCTGCCT GCTGGGCGGC GCGCTGGGCC TCGGGCTCGC AGTCGGCTTC
GGCTCCATCT TCAATGCACT CGATGTCGGC TTTCAGCTGA TCTATTCACC GCTGGCCATG
GTCGGCTCCG CGGTCATCTC GATGGCGATC GGGATCGGCT TCGGCTACAT GCCCGCACGC
AGCGCGTCGC GGCTCGATCC GGCGACAGCG CTGGCGCGGG AATAG
 
Protein sequence
MMAELLIDLQ NVGRRYASGD STVHALRGVD IQIARGEMVA IIGQSGSGKS TLMNILGCLD 
RPTSGSYRIA GREMSSLDPD ELAALRREHF GFIFQRYHLL GELTAAQNAE VPAVYSGLTQ
AARRHKAEAL LRRLGMGSRI DHRPGQLSGG QQQRVSIARA LVNDPDVILA DEPTGALDRA
SGEEVLRILD EISASGRTVI IVTHDAGVAQ RARRIIEIQD GRVISDRLNS RGPTQAQTTA
AEVPAASASS WWRSYLDRFR EAARMALLAM NAHRMRAFLT MLGIIIGVAS VVLVLALGKG
SQARVLKDIN RLGTNTLEFF PGKDFGDTRA NKIRTLVLAD AKVMAEQPYV DAISPTVSTT
STLRFGAIEV SAQVSGVGEQ YFRVKNTELA EGSYLDADTV RSYAQDAVID DNARKALFPD
PDVSPLGSVV LIGKVPCRVV GVTKQQQAGF GSSSTPIVYL PYTTVQARFI GNQVLRSISV
RVDEATPMAA AERAATALLT ARHNAKDFFV LNTDDIRKTV ESTTQVLTLL VAAIAVISLL
VGGIGVMNIM LVSVSERVGE IGVRMAVGAR RSDILMQFLI EAVLVCLLGG ALGLGLAVGF
GSIFNALDVG FQLIYSPLAM VGSAVISMAI GIGFGYMPAR SASRLDPATA LARE