| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6176 |
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| Symbol | murD |
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| ID | 5151497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6413442 |
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| End bp | 6414842 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640560887 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001242006 |
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| Protein GI | 148257421 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.138978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCG TTACCTCATT CGCCGGAAAG ACCGTCGCCG TGTTCGGCCT TGGCGGGTCC
GGGCTCGCCA GTTGCCACGC CCTTCGCGCG GGCGGTGCGG ACGTCGTGGC CGGCGACGAT
GGCGCCGAGC GGCTGGCCGA GGCTGCCAAA GCCGGCTTCG TCACCGCGGA TCTGCGCACC
GTGTCGTGGT CGGATTTCGC GGCGCTGGTG CTGGCGCCCG GCGTGCCGCT GACTCATCCG
GTGCCGCATT GGAGCGTGCT CAAGGCGCGC GAGGCCGGCA TCGAGGTGAT CGGCGACATC
GAGCTGTTCT GCCGCGAGCG CAGGCGGCAC GCACCGGATG CGCCGTTCGT CGCCATCACC
GGCACCAACG GAAAATCGAC GACGACGGCG CTGATCGCGC ATCTGATGCA GACCGCCGGC
TACGACACCC AGCTGGGCGG CAATATCGGC ACCGCGATCC TGTCGCTGGA GCCGCCGCGG
ATGGGCCGGG TTCACGTCAT CGAGATGTCG TCCTATCAGA TCGACCTGAC GCCGTCGCTC
GATCCGACCG TGGGCATCCT GCTCAATGTC AGCGAGGATC ACATCGACCG CCACGGCACG
ATCGAAAACT ACGCCGCGGT CAAGGAGCGC CTGGTTGCCG GCGTCAAGCC GGAGGGGACC
GCGATCATCG GCGTGGACGA TGGCTTTTCG CGCGCGATCG CCGATCGGCT CGACCAGGCC
GGCAAGCGCG TGGTGCGCGT TTCGGTGAAG AACCCGCTGG CTGACGGTCT CTATGTCGAG
CACGAGACCA TCCTGCGCAG CGCAAGTGGC GCGCGCAGCG AGGTCGCGCG GCTCGGCGGC
ATCGGCTCGC TGCGCGGCCA GCACAATGCG CAGAACGCCG CCTGCGCCGC CGCCGCTACC
CTCGCGATCG GCGTGAAGCA GGATGTGCTG CAGCAGGGGC TGCGCAGCTT CCCGGGGCTG
GTGCATCGCA TGGAGCAGGT CGGCCGCCGC GGCCATGTCC TGTTTGTCAA CGACTCCAAG
GGCACCAACG CGGATGCGAC GGCGCATGCG CTGTCGTCTT TCGCCGACAT CTTCTGGATC
GCCGGCGGCA AACCCAAGGC CGGTGGCATC ACCAGCCTCG AAGGTTTCTT TCCGCGCATC
CGCAAGGCCT ATCTGATCGG CGAGGCCGCG GCGGAGTTCG CCGGAACGCT CGGCAACAAG
GTTCCGCACG CGATGTCCGG CACGCTCGAG GTCGCGGTGG CGCAGGCCGC TGCCGATGCC
GAAGCTTCCG GGCTGACGGA CGCCGTGGTC CTGCTGTCGC CGGCCTGCGC CTCGTTCGAC
CAATTCCGCA ATTTCGAGAT CCGCGGCGCC CGCTTCCGCG ATCTGGTGCA GGCGCTGCCG
GGTGTGGAGC GGGTGGTTTA G
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| Protein sequence | MIPVTSFAGK TVAVFGLGGS GLASCHALRA GGADVVAGDD GAERLAEAAK AGFVTADLRT
VSWSDFAALV LAPGVPLTHP VPHWSVLKAR EAGIEVIGDI ELFCRERRRH APDAPFVAIT
GTNGKSTTTA LIAHLMQTAG YDTQLGGNIG TAILSLEPPR MGRVHVIEMS SYQIDLTPSL
DPTVGILLNV SEDHIDRHGT IENYAAVKER LVAGVKPEGT AIIGVDDGFS RAIADRLDQA
GKRVVRVSVK NPLADGLYVE HETILRSASG ARSEVARLGG IGSLRGQHNA QNAACAAAAT
LAIGVKQDVL QQGLRSFPGL VHRMEQVGRR GHVLFVNDSK GTNADATAHA LSSFADIFWI
AGGKPKAGGI TSLEGFFPRI RKAYLIGEAA AEFAGTLGNK VPHAMSGTLE VAVAQAAADA
EASGLTDAVV LLSPACASFD QFRNFEIRGA RFRDLVQALP GVERVV
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