Gene BBta_6150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6150 
Symbol 
ID5149649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6378260 
End bp6379021 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content60% 
IMG OID640560862 
Productputative ABC-2 type transporter (permease protein) 
Protein accessionYP_001241981 
Protein GI148257396 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00809538 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0938496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC GGGCAGTCGG CGCAATCTAC AAATTCGAGA TGGCGCGCAC CTGGCGCACG 
ATCCTGCAGA GCATCGTGTC GCCGGTCGTA TCCACCTCGC TGTATTTCGT GGTGTTCGGC
GCCGCGATCG GCTCGCGGAT CAGCGAGGTC CAAGGCGTCA GCTATGGCAC CTTCATCGTT
CCGGGCCTGG TGATGCTGTC GGTGCTGACC CAGAGCATCG CAAACGCCTC GTTCGGGATC
TACTTCCCGA AATTCATCGG CACGATCTAC GAGATCCTGT CGGCGCCGAT CTCGCATTTC
GAGATCGTGC TCGGCTATGT CGGCGCAGCC GCCACCAAAT CGATCGTTCT CGGGCTGATC
ATCCTGGCCA CGGCCGGGTT GTTCGTGCCG CTGCACATCC AGCATCCGGT CTGGATGCTG
ACCTTCCTGG TGCTGACCGC CATCACCTTC AGCCTGTTCG GCTTCATCAT CGGCATCTGG
GCCGATGGTT TCGAGAAGCT GCAGATGATC CCGATGCTGG TGGTGACGCC GCTAACCTTC
CTGGGCGGCA GCTTCTATTC GGTCAACATG CTGCCGCCGA CCTGGCACAC GATCGCGCTG
CTCAATCCGG TGGTCTACCT GATCTCCGGT TTTCGCTGGA GCTTCTACGA GATCGCCGAC
GTCAGGGTGG AGATCAGCGT CGCCATGACG CTGGGCTTCC TCGTGATCTG CATGTCGATC
ATCTGGTGGA TCTTCAAGAC CGGTTACCGG CTCAAGCATT GA
 
Protein sequence
MNLRAVGAIY KFEMARTWRT ILQSIVSPVV STSLYFVVFG AAIGSRISEV QGVSYGTFIV 
PGLVMLSVLT QSIANASFGI YFPKFIGTIY EILSAPISHF EIVLGYVGAA ATKSIVLGLI
ILATAGLFVP LHIQHPVWML TFLVLTAITF SLFGFIIGIW ADGFEKLQMI PMLVVTPLTF
LGGSFYSVNM LPPTWHTIAL LNPVVYLISG FRWSFYEIAD VRVEISVAMT LGFLVICMSI
IWWIFKTGYR LKH