| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6113 |
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| Symbol | |
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| ID | 5152611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6339546 |
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| End bp | 6341417 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560827 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001241946 |
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| Protein GI | 148257361 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.471766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC GCTCGATCGC GACGGTCTCC ATCTCAGGCG CGCTCGATGA GAAGCTCAAG
GCGATTGCCG CGGCAGGCTT TGAAGCGGTC GAGATCTTCG AGAATGACCT GATTGCGTTC
GGGTTGCGCC CGCGCGAGAT CCGGCAGATG TGCCGCGACC TGGGGCTGTC GATCTGCGCC
TATCAGCCGT TCCGCGATTT CGAGGGCATG CCGGAGCCGC AGCGCGCGCG CGACTTCAAC
CGCGCCGAAC GCAAATTCGA CCTGATGCAG GAGCTCGGCA CGGATCTGCT GCTGATCTGC
AGCAGCGTGT CGCCGGCCTC GCTCGGCGGC ATCGACCGTG CTGCCGCCGA TTTCCACGAG
CTCGGCGAGC GCGCCGCCAA GCGCGGCCTG CGCGTCGGCT ACGAGGCGCT GGCCTGGGGC
CGCCACGTCC ATGACTATCG TGACGCCTGG GAGATCGTGC GCCGCGCCGA TCACAAGGCG
ATCGGCGTCA TTCTCGACAG CTTCCACGCG CTGGCACCGG CGCTGCCGAC CGACGCGATC
CGCGCCATCC CCGCCGACAA GATCTTTCTC GTGCAACTCG CTGACGCGCC GAAGCTCGAG
CTCGACGTGC TATCCTGGAG CCGGCATTTC CGCAGCTTCC CCGGGCAGGG CGACCTCCCG
GTTAGCGCGT TCATGGAGGC GGTGGCGGCG ACCGGCTATT CCGGGCCGCT GTCGCTCGAG
ATCTTCAACG ACCAGTTCCG CGCAGGTTCT GCGCCGCGTA CCGCGCTCGA CGGCATGCGT
TCGCTGCTGC TGCTGCAGGA TGATCTGGCC GGGACGATGC CGGCTGCGTC CGAGCCGCGC
TTCGAGCCCC GCGTCAAGAG CCACGGCATC GGCTTCGTCG AGTTCGCCGT CAGCGAGGAC
AAGGCGGCGT CGCTGGCGAC GTTGTTCCGC CAGCTCGGCT TCCGCAACAC CGGACGCCAT
CGTAGCAAGG CAGTGCAGCG CTGGACGCAG GGCGCGGTCG AGCTGGTGAT CAATTGCGAG
CCGGCGAGCT TTGCGCATTC GCATTACGTC ACGCACGGAC CCGGCGTCTG CGCGCTGGCA
CTCGACGTCG ACAGCGCCGA CCGCGCCATG GCGCGCGCGC AGTCCTTGAA GACCCGCACC
TTCGTGCAGC CGGTCGGTCC GGGAGAGCTG GAGATCCCGG CGATCCACGG CGTCGGCGGC
AGTCTCTTGT ATTTCCTCGA CACGCACGGC CGGCATTGGG ACGTCGATTT CGAGGCTGTT
ACCAGCGACG CGGGGGCCGA CCGGCTCGTT GCGGTCGATC ACATTGCGCA GTCCATGCCG
CACGAGGAGA TGCTGTCCTG GCTGCTGTTC TACTCGGGGC TCATCGACTT CTCCCGCCTG
CCGCAGATGG AGATCGCCGA TCCCAGGGGC CTCGTGCAGA GCCAGGCGAT CGTCAACGGC
GATCGCAGCC TGCGCTTCAT CCTTAACGGC TCGACCGCGA CGCGGACGCT GTCGTCGCGC
TTCATCTCCG AATTCTTCGG CTCCGGCGTC CAGCACATCG CTTTCTCCTG CGACGACATC
TTCGCGGCCG TGGCCGAGAT GCGCGCCCGC GGCGCCGGCT TCCTCGACAT TCCCGACAAT
TACTACGACG ATCTCGAAGC CAAATATGAT CTCGCGCCCG AGACCATCGC GGCGCTCCGC
GCCAACGAGA TCCTCTACGA CCGGGACGGC GACGCGGAGT TCTTCCAGGT CTACACCCAT
ATCTTCGAGG AGCGCTTCTT CTTCGAGATC GTGCAGCGGC GCAACTATCA GGGGTTTGGC
GCAGCCAATG CCGCGATCCG TCTTGCGGCC CAGGCCCGCG AGGTGCGGCC CGACACGATG
CCGCGACTGT AG
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| Protein sequence | MNTRSIATVS ISGALDEKLK AIAAAGFEAV EIFENDLIAF GLRPREIRQM CRDLGLSICA
YQPFRDFEGM PEPQRARDFN RAERKFDLMQ ELGTDLLLIC SSVSPASLGG IDRAAADFHE
LGERAAKRGL RVGYEALAWG RHVHDYRDAW EIVRRADHKA IGVILDSFHA LAPALPTDAI
RAIPADKIFL VQLADAPKLE LDVLSWSRHF RSFPGQGDLP VSAFMEAVAA TGYSGPLSLE
IFNDQFRAGS APRTALDGMR SLLLLQDDLA GTMPAASEPR FEPRVKSHGI GFVEFAVSED
KAASLATLFR QLGFRNTGRH RSKAVQRWTQ GAVELVINCE PASFAHSHYV THGPGVCALA
LDVDSADRAM ARAQSLKTRT FVQPVGPGEL EIPAIHGVGG SLLYFLDTHG RHWDVDFEAV
TSDAGADRLV AVDHIAQSMP HEEMLSWLLF YSGLIDFSRL PQMEIADPRG LVQSQAIVNG
DRSLRFILNG STATRTLSSR FISEFFGSGV QHIAFSCDDI FAAVAEMRAR GAGFLDIPDN
YYDDLEAKYD LAPETIAALR ANEILYDRDG DAEFFQVYTH IFEERFFFEI VQRRNYQGFG
AANAAIRLAA QAREVRPDTM PRL
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