Gene BBta_6097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6097 
SymbolhflK 
ID5153279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6325092 
End bp6326231 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content66% 
IMG OID640560811 
Productprotease activity modulator HflK 
Protein accessionYP_001241930 
Protein GI148257345 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGA AGAATCAGGG CGGAGGCCCT TGGGGTCCGG GTCCGAAGGG GCCCTGGGGC 
TCGGGACCGC AACCGGTCGG TCCAAGGCCA CCGGACCTCG AAGATCTTCT GCGGCGCGGT
CAGGACCGGC TTCAGCAGTT CATTCCGGGG GGCGGCTTCG GCGCCGTCGG CGTGCTCCTG
GTCGTGGTCG GCGCGATCGC GATCTGGCTC CTGTCCGGCT TCTACAGGGT GCAGTCCGAA
GAGCTCGGCG TCGTGCTGCG CTTCGGCAAA TATGTCCGTG ATGAGCAACC CGGCCTGCGC
TACCATTTGC CCTATCCGAT CGAGACCGTG CTGCTGCCGA AGGCGCTGCG CGTCAATTCG
ATCTCCATCG GCATCACCGC CAATGACGAT CCGGGCCGGC GTGGCCGTGG CGGCCGCGAT
GTTCCCGAGG AAAGCCTGAT GCTGACCGGC GACGAGAACA TCGTCGATGT CGACGTCACG
GTGCTGTGGC GCATCAAGCC GAAGGGCGCT GCCGACTTCC TGTTCAACAT CCAGAACCCT
GAGGGCACGG TGAAGGCCGT GGCCGAAAGC GCGATGCGCG AGGTGATCGG CCGTTCCAAC
ATTCAGCCGA TCCTCACCGG CGCCCGCACC GTGATCGAGC AGAACGTGCA GGAGCTGATG
CAGAAGACGC TCGATAATTA TGGCTCGGGC ATCCAGATCA CCCAGGTGCA GATGCAGAAG
GTCGACCCAC CGGCGCAGGT GATCGAGGCG TTCCGCGACG TTCAGGCGGC CCGTGCCGAC
CTCGAGCGGC TGCAGAACGA GGCGCAGACC TACGCCAACA AGGTGGTGCC GGATGCGCGC
GGCCGCGCCG CGCAGATCCT GCAGGTCGCC GAAGGCTACA AGGAGCAGGC GATCGCCGAG
GCCAAGGGTC AGAGCGCGCG TTTCATCAAG GTCTATGACG AGTACAAGAA GGCCCCGAAC
GTGACCCGCG AACGCATTTA TCTCGAGACG ATGGAGCGCG TGCTCTCCGG CTCCGAGAAG
CTCGTGCTCG ACGGCGGCCC GTCCGGCGGC CCCGTGCCGT TGCTGCCGCT CGGCGATCTC
GCGCCGCGCC GCCAAGGCCA AAGTCAGGGC CCCGCGACCC AGCAGGGAGG CGTCCGATGA
 
Protein sequence
MAWKNQGGGP WGPGPKGPWG SGPQPVGPRP PDLEDLLRRG QDRLQQFIPG GGFGAVGVLL 
VVVGAIAIWL LSGFYRVQSE ELGVVLRFGK YVRDEQPGLR YHLPYPIETV LLPKALRVNS
ISIGITANDD PGRRGRGGRD VPEESLMLTG DENIVDVDVT VLWRIKPKGA ADFLFNIQNP
EGTVKAVAES AMREVIGRSN IQPILTGART VIEQNVQELM QKTLDNYGSG IQITQVQMQK
VDPPAQVIEA FRDVQAARAD LERLQNEAQT YANKVVPDAR GRAAQILQVA EGYKEQAIAE
AKGQSARFIK VYDEYKKAPN VTRERIYLET MERVLSGSEK LVLDGGPSGG PVPLLPLGDL
APRRQGQSQG PATQQGGVR