Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6094 |
Symbol | |
ID | 5153276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6322104 |
End bp | 6323600 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560808 |
Product | putative Serine protease do-like precursor |
Protein accession | YP_001241927 |
Protein GI | 148257342 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAA CCCTTGCTCT CAGCCGCTTG CGCCCGATCG TGACCGCGGC GGTTTTCGCC GTCGGCTGGG CGCTCGCGCC GGCGCCGGCT TCGGCACGGG GGCCCGAGGG GATTGCCGAC GTCGCCGAAA AGGTGATCGA CGCGGTGGTC AACATCTCGA CCTCGCAGAC CGTCGAGGCC AAGGGCGGCG GAGAGGGGCG CGGCGCCAAT CCGCAGGTGC CGCCGGGCTC GCCGTTCGAG GAGTTCTTCG ACGACTTCTT CAAGAACCGC CGCGGCGGCC CAGGCGGCCG GGGCGGGGCC GACAACTCGC CACGCCGCAC CAATTCGCTG GGCTCGGGCT TCATCGTCGA CGATTCCGGC GTGGTCGTCA CCAACAACCA CGTCATCGCC GATGCTGACG AGATCAACGT GATCATGAAC GACGGCACCA AGATCAAGGC CGAGCTGGTC GGCGTCGACA AGAAGACGGA CCTCGCGGTG CTCAAGTTCA AGCCGCCGCG GCCGCTGACC GTGGTGAAGT TCGGCGATTC CGACAAGCTT CGGCTGGGCG ACTGGGTGGT CGCGATCGGC AACCCGTTCA GCCTCGGCGG CACCGTCACC GCGGGCATCG TCTCGGCCAA GAACCGCGAC ATCTCGTCGG GGCCCTATGA CAGCTACATC CAGACCGACG CCGCGATCAA TCGCGGCAAT TCCGGCGGTC CGCTGTTCAA CCTCGACGGC GAGGTCATCG GCGTCAACAC CCTGATCATC TCGCCGTCGG GCGGCTCGAT CGGCATCGGC TTCGCGGTGC CGTCGAAGAC GGTGGCCGGC GTCGTCGACC AGCTGCGCCA GTTCGGCGAA CTGCGCCGCG GCTGGCTTGG TGTGCGCATC CAGGGCGTCA CCGACGAGAT CGCGGAGAGC CTCAACATCA AGCCGGCGCG CGGCGCGCTG GTCGCAGGCG TCGACGACAA GGGACCGGCC AAGCCGGCGG GCATCGAGCC GGGCGACGTG GTCGTCAAGT TCGACGGTCA TGACATCAAG GAGCCGAAGG ACCTGTCGCG GATCGTCGCC GACACCGCGG TCGGCAAGGA AGTCGATGTC ATCGTCATCC GCAAGGGCCA GGAGCAGACG CTCAAGGTCA AGCTCGGCCG GCTCGAGGAC AACGAGAAAG TGCAGCAGGC GGCGATCAAG AAGGACGAGC CGGCCGAGAA GCCCCAGACG CAGAAGGCGC TCGGGCTCGA TCTCGCCGCG CTGTCGAAGG ATCTGCGCAC GCGCTACAAG ATCAAGGACA GCGTCAAGGG CGTCATCGTC ACCGGCGTCG ACCAGGGCTC CGATGCCGCC GAGAAGCGCC TGTCGGCCGG CGACGTCATC GTCGAGGTTG CGCAGGAGGC CGTGACCTCC GGCGCCGATA TTAAGAAGCG GGTCGACCAG CTCAAGAAGG ACGGCAAGAA GTCGGTGCTG CTTTTGGTCT CCAACGCCGA CGGCGAACTC CGCTTCGTGG CGCTCAGCCT GCAGTAA
|
Protein sequence | MTATLALSRL RPIVTAAVFA VGWALAPAPA SARGPEGIAD VAEKVIDAVV NISTSQTVEA KGGGEGRGAN PQVPPGSPFE EFFDDFFKNR RGGPGGRGGA DNSPRRTNSL GSGFIVDDSG VVVTNNHVIA DADEINVIMN DGTKIKAELV GVDKKTDLAV LKFKPPRPLT VVKFGDSDKL RLGDWVVAIG NPFSLGGTVT AGIVSAKNRD ISSGPYDSYI QTDAAINRGN SGGPLFNLDG EVIGVNTLII SPSGGSIGIG FAVPSKTVAG VVDQLRQFGE LRRGWLGVRI QGVTDEIAES LNIKPARGAL VAGVDDKGPA KPAGIEPGDV VVKFDGHDIK EPKDLSRIVA DTAVGKEVDV IVIRKGQEQT LKVKLGRLED NEKVQQAAIK KDEPAEKPQT QKALGLDLAA LSKDLRTRYK IKDSVKGVIV TGVDQGSDAA EKRLSAGDVI VEVAQEAVTS GADIKKRVDQ LKKDGKKSVL LLVSNADGEL RFVALSLQ
|
| |