| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6002 |
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| Symbol | putA |
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| ID | 5154103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6215794 |
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| End bp | 6219474 |
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| Gene Length | 3681 bp |
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| Protein Length | 1226 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640560724 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase |
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| Protein accession | YP_001241846 |
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| Protein GI | 148257261 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0192135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCG CGGAGACCGC CGCTGGCCCT GGCCCTGTGC CGCCGCCGTT TGCCGCATTC
AACGCTGATC TTCGCACCCC GAGCGAGCTG CGGGCTGCGA TCAGTTCGGC CCATCGCCGG
AACGAGCCGG AGTGCGTGCG GCCGCTGCTC GATCTCGCGG CGTTGTCCGG AGCGGCGTCG
GAGCGGGCGG CCGCCGTGGC GCGGGATCTC GTCGTTCGCT TGCGAAGCAA GGCGCCATCG
GGCGGGGTCG AGGGCCTGAT CCATGAATAT GCGCTCTCCA GCCAGGAGGG CGTCGCGCTG
ATGTGTCTGG CCGAGGCGCT GCTGCGGGTT CCGGATACGG CGACGCGCGA TGCGCTGATC
CGCGACAAGA TCGCGACCGG CGATTGGCGC GCTCACATCG GACATAGTCC GTCTCTGCTC
GTGAACGCCG CGACCTGGGG CTTGATCGTC ACCGGCAAGC TCACGGCTGC CGCCAGCGAG
GACAGCCTTG CCTCGGCGCT CACGCGGCTG ATCGCGCGGG GCGGTGAGCC GATCATCCGC
CAGGGCGTCA CGCTTGCGAT GCGGCTGTTG GGCGAGCAGT TCGTGGCGGG GGAAACCATT
GAGGATGCGC TCTCGAACGG CCAGCGCTGG GAGGCGCGAG GGTTCCGCTA CTCCTACGAT
ATGCTTGGAG AGGCTGCGAC CACCGCGGCC GACGCGACCC GCTACGTCGC CGCTTACCAG
GCCGCGATCC AGGCCATCGG ACGCCATTCG GCCGGCCGCG GCATCTATGA GGGGCCGGGG
ATCTCGATCA AGCTGTCGGC GCTTCACCCG CGCTACAGCC GGATGAAGCG GGGCCGCGTG
CTCGGCGAGC TGCTGCCGCG CCTCAAACAG CTGGTGTTGC TGGCCCGGCA GCACGACATC
GGACTCAACA TCGACGCCGA GGAGGCCGAT CGTCTCGATC TGTCGCTCGA CCTGCTCGAG
GCACTCTGCT GCGACGCGGA TCTCGCCGGC TGGAACGGCA TCGGCTTCGT CGTCCAGGCC
TATCAGAAGC GCTGCGCCTT CGTGATCGAT TGGATCATCG ATCTGGCGCG CCGCTCGCAG
CGGCGGTTGA TGGTGCGGCT GGTCAAGGGC GCCTATTGGG ACAGCGAGAT CAAGCGCGCC
CAGGTCGATG GCCTCGAGGA CTTTCCGGTG TTCACGCGCA AGGCCCATAC TGACGTGTCC
TACTTGGCCT GCGCCCGGAA GCTGCTGCGC GCGCCCGACG CGGTGTTTCC GCAATTCGCT
ACCCACAACG CGCGCACATT GGCCTCGGTC ATCGAAATGG CCGGACCAAA CTTCTATCAG
GGCCAGTATG AGTTCCAGTG CCTTCACGGC ATGGGCGAGC CGCTTTACGA GGAAATCGTC
GGCCCCGGAA GGCTGGCGCG GCCCTGCCGG ATCTATGCTC CGGTTGGCTC GCATGAGACA
TTGCTGGCCT ATCTCGTTCG CCGGCTGCTC GAGAACGGTG CGAACACCTC CTTCGTCAAC
CGCATCGCCG ATCCCGCGGT GGTGATCGAG GACTTGATCG CGGATCCCGT GCAGCTGGTG
CGATCCGCGT CGCGTCCGGG CGCTGCCCAT GAGAGGATTC GCACGCCGCG GGATGTGTTC
GGCTCGCAGC GGCCGAACTC CGCCGGGCTC GATCTCGCCG ACGAAAGCGA GCTCGCGCGG
CTTGGCACGG ACCTGACGCG CAGCGCCGGC GTGTCATGGC GTGCGCTGCC GTCGACAGCA
GCAGGCGGGG AATGCGCACG CATCATCCGC AATCCCGCGG ATCGTCGTGA CGTCGTCGGC
CATGTCCGGG ATGCGACGGC GCGCGAGATC GAGGCGGCCC TGTCCAATGC GGTGGCGGCG
GCGCCGGGAT GGGCTGCGAC CAGCGTGCGC GAGCGCGCCA TCTCTTTGCG CGCAGCCGCG
ACCGTGATGG AGGCGCAGCG GCGCATTCTG ATCGGTCTGA TCGTGCGCGA AGCCGGCAAA
TCCTATGCAA ATGCCGTTGC GGAGGTGCGC GAGGCGGTCG ATTTCCTGCG CTATTATGCG
GACGAGATCG CAACGCCTGA CGATGCGGGG GTGCGTCCGG CGCTCGGGCC CGTGGTCTGC
ATCAGCCCGT GGAACTTTCC GCTCGCGATC TTCACCGGCC AGGTCGCGGC TGCGCTCGCG
GCCGGCAATC CGGTGCTGGC GAAGCCGGCC GAGGAGACGC CGCTGATCGC CGCCGAAGCC
GTGCGCATCC TGTGCGAGGC CGGCTTGCCG CCGGGCGTCC TGCAATTGCT GCCCGGTGAC
GGACAGGTCG GCGCGGCGCT GGTCGCGGAC CCGCGCGTGC AGGGCGTCAT CTTCACCGGA
TCGACCGCCG TCGCACGTCT GATCCAGACC CAATTGGCCA CACGCGTCAC CGTTGACGGA
CGGCCCGTTC CGCTGATCGC CGAGACCGGC GGGCAGAACG CGCTGATCGT GGACTCCTCC
GCGCTTGCGG AGCAGGTCGT CGGCGACGTC ATCGCATCCG CTTTTGATTC GGCCGGCCAA
CGCTGCTCCG CCTTGCGCAT CCTCTGTCTG CAGGAGGAGG TCGCAGATCG CATCCTCGTC
ATGCTGCGCG GCGCCATGCG CGAGCTCGAG GTCGGCAATC CGGCGTTGCT GTCGACCGAT
ATCGGGCCGG TCATCAGCGC AGAGGCGCGG GACAATATTG CCGCCCACGT GGCGATGATG
CGCGATCGTG GTCATGCGGT GGATGAACTG ATCTTGCCGC CGGGCACGGC GACTGGGACG
TTCGTCGCGC CAACCCTCAT CGAGATCGAC GAGATTGCCG AGGTCGAGCG CGAAGTGTTC
GGTCCCGTTC TCCACGTGCT GCGCTATCGG CGCGAGGAGC TTGCCGATCT CGTCGGCGCG
ATCAACGCCA CCGGCTATGG TCTGACATTC GGCATCCATT CGCGCATCGC GGAGACGATC
GCGCAATTGT CCGCTGACAT CCGTGCCGGT AACATCTACG TCAATCGCAA CATCATCGGT
GCGGTGGTCG GCGTTCAGCC ATTCGGCGGC GCCGGCCTGT CGGGCACCGG CCCGAAAGCC
GGAGGTCCCC TGTATCTGCG GCGGCTGTCG GCCGCACCGT CCGATGCGGT CCGCGGCATG
GCCGGCCGTC CCGACCCGGC AGCGCAGGCC TATGTTGCAT GGCTGCGCGG CCAGGGGCAG
GCCGAACTGG CGGCCCGCTG CGAGGCCTAT CTGTCGCGCT CGCTCGCTGG CGCGGCGATC
GAACTGCCGG GACCGGTGGG CGAACAGAAC ATGTATCGCC TCGTGCCGCG CGGGGCCGTG
CTTGCGCTGG CGCAGAGCGA GGAAGCGCTG CTGCTTCAAT GCGGTGCCAT TCTGGCGACG
GGCAATCAGG TCGTCGCCGA GGCGTCAACA TGTGCGCGCG CGATGGTCGG CGGGCTCGGG
CCGTCGCACC TTGCGCGGGT TCGGCTTGTC GACTCCTGGC GCGATGTCGA CGACATCCAG
GCGGTCCTGT TCGACGGTGC GATCCCACAA CTGCTCGCGC TGACCAGAGA GCTGGCCGAG
CGGCCCGGGC CCATCATTCC CGTGATCATC AAGCGTGCGG TGGACGGAGA CGATGAGCTC
GACAGACTCG TCAGAGAAGT CTGCGTGTCG ACCAACACGG CGGCTGCTGG CGGCAATGCC
AGCTTGATGT CGATCGGATG A
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| Protein sequence | MPLAETAAGP GPVPPPFAAF NADLRTPSEL RAAISSAHRR NEPECVRPLL DLAALSGAAS
ERAAAVARDL VVRLRSKAPS GGVEGLIHEY ALSSQEGVAL MCLAEALLRV PDTATRDALI
RDKIATGDWR AHIGHSPSLL VNAATWGLIV TGKLTAAASE DSLASALTRL IARGGEPIIR
QGVTLAMRLL GEQFVAGETI EDALSNGQRW EARGFRYSYD MLGEAATTAA DATRYVAAYQ
AAIQAIGRHS AGRGIYEGPG ISIKLSALHP RYSRMKRGRV LGELLPRLKQ LVLLARQHDI
GLNIDAEEAD RLDLSLDLLE ALCCDADLAG WNGIGFVVQA YQKRCAFVID WIIDLARRSQ
RRLMVRLVKG AYWDSEIKRA QVDGLEDFPV FTRKAHTDVS YLACARKLLR APDAVFPQFA
THNARTLASV IEMAGPNFYQ GQYEFQCLHG MGEPLYEEIV GPGRLARPCR IYAPVGSHET
LLAYLVRRLL ENGANTSFVN RIADPAVVIE DLIADPVQLV RSASRPGAAH ERIRTPRDVF
GSQRPNSAGL DLADESELAR LGTDLTRSAG VSWRALPSTA AGGECARIIR NPADRRDVVG
HVRDATAREI EAALSNAVAA APGWAATSVR ERAISLRAAA TVMEAQRRIL IGLIVREAGK
SYANAVAEVR EAVDFLRYYA DEIATPDDAG VRPALGPVVC ISPWNFPLAI FTGQVAAALA
AGNPVLAKPA EETPLIAAEA VRILCEAGLP PGVLQLLPGD GQVGAALVAD PRVQGVIFTG
STAVARLIQT QLATRVTVDG RPVPLIAETG GQNALIVDSS ALAEQVVGDV IASAFDSAGQ
RCSALRILCL QEEVADRILV MLRGAMRELE VGNPALLSTD IGPVISAEAR DNIAAHVAMM
RDRGHAVDEL ILPPGTATGT FVAPTLIEID EIAEVEREVF GPVLHVLRYR REELADLVGA
INATGYGLTF GIHSRIAETI AQLSADIRAG NIYVNRNIIG AVVGVQPFGG AGLSGTGPKA
GGPLYLRRLS AAPSDAVRGM AGRPDPAAQA YVAWLRGQGQ AELAARCEAY LSRSLAGAAI
ELPGPVGEQN MYRLVPRGAV LALAQSEEAL LLQCGAILAT GNQVVAEAST CARAMVGGLG
PSHLARVRLV DSWRDVDDIQ AVLFDGAIPQ LLALTRELAE RPGPIIPVII KRAVDGDDEL
DRLVREVCVS TNTAAAGGNA SLMSIG
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