Gene BBta_6000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6000 
Symbol 
ID5154240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6215324 
End bp6215575 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content67% 
IMG OID640560723 
Producthypothetical protein 
Protein accessionYP_001241845 
Protein GI148257260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.374774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00517739 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCGTTTC TGGATCGCAT CGCGGCGGTC GGCAGCGTCG GCGGCAAGCT CCGCGCCGGC 
TTCGGGTTCG ATCGTGGGGG CTTTGTCGAG CCGGATCACG GCAGGTCCGG CGATACGCCC
GCCCCCGTTC GGCTCACCGC CCGCGGCGCG CGCGCCAAGG GAACCGGTAT GATCGTTCAG
CTTGTCAACG GGGTCGTGCA TCTGGCAGCT CCGAGCCCTG AAGCGACGTT ACTAATCCTC
TCGGCAGATT AG
 
Protein sequence
MSFLDRIAAV GSVGGKLRAG FGFDRGGFVE PDHGRSGDTP APVRLTARGA RAKGTGMIVQ 
LVNGVVHLAA PSPEATLLIL SAD