| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5989 |
|---|
| Symbol | hyuB |
|---|
| ID | 5154193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6202208 |
|---|
| End bp | 6203941 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640560712 |
|---|
| Product | N-methylhydantoinase B (Hydantoin utilization protein B) |
|---|
| Protein accession | YP_001241834 |
|---|
| Protein GI | 148257249 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0982181 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCC TGGATCCGAT CACGCTCGCC GTGCTCAAGG GCCGGCTGGA GCAGATTGCC
GACGAGATGG ACGCGACGCT CTATCGCTCG GCCTTCAACC CGACGATCGC TGAAGCGCGC
GACGCCTGCC ACGGCATCTA CCATGCCACG ACCGGCGATA CCTTGGTGCA GGGGCAGGGC
GGCCTGCCGA TCTTCGTCGG CGCGATGGCC TTCGCCGTGC GCGCGGTCAT CGCCAAGGTC
GCCGCGGACG GCGGCCTCGA AGAGGGCGAC ACCTTCATCT TCAACGATCC CTATGACGGC
GGCACGCATC TCAACGACTT CCGTCTGGTG CGTCCGGTGT TCCGCAACGG CAAGGTCTTT
TGCTGGATCG CCTCGGTCGG CCACTGGCTC GACATCGGCG GCAATGTCGC CGGCGGCTAC
AATCCGAAGG CGGTCGAGAG TTTTCAGGAA GGCATGCGCA TTCCACCGGT GAAGCTGATC
GCGGCGGGGC GGATGAACCA CGACATTCTC GGCATCATCG AAGCCAATTC ACGGGTGCCG
ATGTCGAACT GGGGCGACCT CAACGGCCAG CTCAACGCGC TCGATCTCGG CGAGGGGCGC
CTGCGCGCGC TGCTCGACGA CTACGGCGAT AGGACGGTGG CCGACGCCTT CGAGGCGTTC
TCCGATCGCG CCGAGACATT GATGCGCGCA GCCATCGCCT CGCTGCCCGA CGGCGCCTAT
TCGTTCGAGG ACGTGCTCGA CAATGACGGC ATCGTCGACG AACCGCTGAC GGTGGCGCTC
GACGTCACCA TTGCCGGCGA CACGATGACG CTCGACTTCA CCCGCTCGTC CGGCGCCTGC
AAGGGCCCGA TCAACATCTC GCGCTCGACC ACGATCGCCG CCTGCTATGT CGCGCTGAAG
CATGTGTTCA CCGAGGTGCC CGCCAATGCC GGCTGCCTCC GGCCGATCGC GTTCGAGATT
ACCGACGGCT CGCTGCTGGC GGCGGGGCCG CCGAAGCCGG TCGCGGGCTA TACCGAGACC
ATCCTGCGCC TGATCGGCGT CGTGCTCGGC GCGCTCGCCA AGGCCGATCC GTCGCGCGCC
ACGGCCGCGC CGTTCGGCAC CATCAATGCG CTGTCGATCG CCGGCCATCG CAAGGATAAC
AGCCGTTTTG TGATGTTCTC GTTCTTCGGC GGCGGCCTCG GCGGCAATCC GGCGACCGAC
GGCCTCAACC ACGCCAACAA TCCGATCTCC ACGGCGACCA TTCCTCCAGT CGAAATTCTG
GAAGCGGCCT ATCCTGTGAT GTTTACGCAA TGGGCGCTGC GCCCGGACTC CGCCGGCGCC
GGCACCCATC GCGGCGGCGT TGGCGCGATC TACGAGGTCG AGCTGCTGGC CGATGCCGAT
GTGGCGCTGC TCGGCGAGCG CGGCAAGGCG GCGCCGTTCG GCGTTGCCGG TGGCGGCAGC
GCCGCGCTCA ATCGCTTCAC CTGGCAAACG GATGATGGCG AGGCGAACCC GCCGATGGTC
TCCAAGATCA CGGATCTGCA TCTGAAGGCG GGCAAGCGCG TGCGGCTGGA AACGCCCGGA
GGTGGCGGTT GGGGACCGCC AGAGGCACGG CCCGTCGCGG CGGTCGCCCA TGACGTCGCG
CTCGGCTTCG TCTCGCCGGC GCAGGCGCGC GAGGTCTACA AGGTCGCGGT AGCAGTGGAT
GGCGTGGTCG ATGAAGCTGC CACGCGCATG CTGCGCGCGG GAGGTGCGGC ATGA
|
|---|
| Protein sequence | MTTLDPITLA VLKGRLEQIA DEMDATLYRS AFNPTIAEAR DACHGIYHAT TGDTLVQGQG
GLPIFVGAMA FAVRAVIAKV AADGGLEEGD TFIFNDPYDG GTHLNDFRLV RPVFRNGKVF
CWIASVGHWL DIGGNVAGGY NPKAVESFQE GMRIPPVKLI AAGRMNHDIL GIIEANSRVP
MSNWGDLNGQ LNALDLGEGR LRALLDDYGD RTVADAFEAF SDRAETLMRA AIASLPDGAY
SFEDVLDNDG IVDEPLTVAL DVTIAGDTMT LDFTRSSGAC KGPINISRST TIAACYVALK
HVFTEVPANA GCLRPIAFEI TDGSLLAAGP PKPVAGYTET ILRLIGVVLG ALAKADPSRA
TAAPFGTINA LSIAGHRKDN SRFVMFSFFG GGLGGNPATD GLNHANNPIS TATIPPVEIL
EAAYPVMFTQ WALRPDSAGA GTHRGGVGAI YEVELLADAD VALLGERGKA APFGVAGGGS
AALNRFTWQT DDGEANPPMV SKITDLHLKA GKRVRLETPG GGGWGPPEAR PVAAVAHDVA
LGFVSPAQAR EVYKVAVAVD GVVDEAATRM LRAGGAA
|
|---|
| |