| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5978 |
|---|
| Symbol | |
|---|
| ID | 5154079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6190946 |
|---|
| End bp | 6191560 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640560701 |
|---|
| Product | heme-binding protein |
|---|
| Protein accession | YP_001241823 |
|---|
| Protein GI | 148257238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.404272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCT GGCTGGCCAG CCTTGCCATG CTCGTGATCG CCGGCGCCGC CATTGCCGCG
GGGCCGCTGA TGAGCCGAGT CGAACATCCC AAATACGACA CCGTCAGTCG CGATGGCGAT
TTCGAGATCC GCGCCTATGC GCCGATGATC ATTGCGGAGG CCGAGGTGCA GGGCGCACGC
AAGCCGGCCA TCGAGGAGGG CTTTCGCATC ATCGGCGGCT ATATCTTCGG TGCCAATCAG
GGCAGGATGA AGATCGCGAT GACCGCGCCG GTGCAGCAAC AGGCAGCGGC ATTGCCGGCA
CCGGGGGACG AGACCGGCAG CGATCGCTGG AAGGTCAGCT TCGTGATGCC GTCGAGCTGG
TCGCTCGACA CCCTGCCGCC GCCCGCCGAC ACGCGCATCA AGCTGAACTC GCTGCCGGCC
CAGCGCATGG TCGCAATCAC CTTCTCCGGC TCCTATTCCG ACGGCATCAT CGCCGAAAAG
ACCCGCGAAC TGCGCGACTA CGCGCAGCGC AAAGGCCTGA CCGTCACCGG ATCCCCATTG
CTCGCATTCT ACAACCCGCC CTGGACCCTG CCGATGCTGC GCCGGAACGA GGTGATGCTG
GCGTGTAGTT GTTAG
|
|---|
| Protein sequence | MLIWLASLAM LVIAGAAIAA GPLMSRVEHP KYDTVSRDGD FEIRAYAPMI IAEAEVQGAR
KPAIEEGFRI IGGYIFGANQ GRMKIAMTAP VQQQAAALPA PGDETGSDRW KVSFVMPSSW
SLDTLPPPAD TRIKLNSLPA QRMVAITFSG SYSDGIIAEK TRELRDYAQR KGLTVTGSPL
LAFYNPPWTL PMLRRNEVML ACSC
|
|---|
| |