| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5964 |
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| Symbol | |
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| ID | 5153599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6173699 |
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| End bp | 6175363 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640560687 |
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| Product | putative quinoprotein ethanol dehydrogenase |
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| Protein accession | YP_001241809 |
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| Protein GI | 148257224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.206262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.383589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGA TCGCGCTGGC CGCAGGCCTC GCCATCTTTG CATCACATGG TGCAAGCGCG
CAGAGTGCCG ATCAGTTGGT CAAGGGTGCC ACTGATACGG CAAACGTCCT GAACTACGGG
ATGGGCTACA ATCTGCAGCG GTTCAGCCCG CTCACGCAGA TCAACAAAGA CAACGCGAAG
AACCTGGTTC CGGTGTGGAA TTACAGCTTC GCCGATGACC GCAGCGAGGA GTCGCAGCCG
CTCGTTTATC AGGGCGTGCT CTACGTCACG ACTCACAACG CCACGATGGC GGTCGACGCC
AAGACCGGCA AGCAGATCTG GAAGAGCAAG ATCGACTATC CCGCCGAGAC GCCGCGCGTC
GTGTGCTGCG GCATCATCAA CCGCGGTGCC GCCCTGTTCG ACGGCAAGGT CTTCCGCACA
ACGCTCGATG CCAATGTGAT CGCGCTCGAT GCCAAGACCG GCAAGGAGCT GTGGCGTCAG
AAGGCCGCCG ACATCAAGGA AGGCTATTCG ATGACCGTGG CGCCGCTGGT GGCGGATGGC
GTCGTGATCA CGGGTATCTC CGGTGCCGAG TTCGGGACCC GCGGCTTCAT CGATGGCTGG
GATCCGGCCA CGGGCAAGCA TTTGTGGCGT ACCCACACCG TTCCCACTCC GGACGAGCCC
GGCGGCGACA CCTGGAAGGG CGACACCTGG AAACTGGGCG GTGGCTCGAC CTGGATCACC
GGCTCATACG ATCCCGAGCA GAACACCGTG TTCTGGGGCG TCGGCAACCC CGGTCCGTTC
AACGCGGCGG TGCGGCCCGG CGACAATCTC TACACCTGCT CGGTGCTCGC GCTCGACCCC
AAGACCGGGA AGATGAAGTG GCACTTCCAG TTCTCGCCGA ACAATCCGTT CGATTATGAC
GCGGTCGCGG AGATGGTGCT CGCCGACATG AACGTCGAGG GCAAGCCGAC CAAGGTGCTG
ATGAACGCCA ACCGCAACGG CTTCTTCTAC GTGCTTGATC GCTCCAACGG CAAGCTGCTG
GCTGCCAACC CCTATGTGAA AGTCAACTGG GCCTCCAGCA TCGATCTGAA GACCGGCAAG
CCGGTCGAGA CCGATGTCAC GCGTGATGCG CGCGAGGGCA AGAAGGTCAC GGTCTATCCG
TCGATCCTTG GCGGCAAGAA CTGGCAGCCG ATGTCGTTCA ATCCGCAGAC CGGACTGGCT
TACGCCAACA CCCTCGTCTT CGGCGGCCAC TACAAGACCG AGCCTGCCAC CTACAAGGCC
GGCGAGTGGT ATCTCGGCAT GGATCTGACC GATCTGTGGG ATTGGCCGGA AGGTCCGCGT
GGCCAGCTCA AGGCCATCGA TCCCATGACC GGCAAGACCA AATGGGAGCA GCCGAGCGAC
ATTCCGCGCT TCTCGGGCGT GCTGTCGACG GCCGGCGGCG TCGTGTTCTC GGGCAAGCTG
ACGGGCGAGT TCGAGGCCTT TGATGCCGAC AGCGGCAAGA AGCTGTGGCA GTTCCAAACC
GGCTCGGGCA TCGAGGGGCA GCCTGTCACC TGGCAGCAGG ATGGCGTTCA GTACGTCGCC
GTCACCTCCG GCTATGGCGG TGTCTATTCC CTGTTCTCCG GCGACGAGCG ACTGGCCAAT
GTGCCGGCGG GCGGCTCGCT GTGGGTTTTC GCGGTCAAGA ACTGA
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| Protein sequence | MKRIALAAGL AIFASHGASA QSADQLVKGA TDTANVLNYG MGYNLQRFSP LTQINKDNAK
NLVPVWNYSF ADDRSEESQP LVYQGVLYVT THNATMAVDA KTGKQIWKSK IDYPAETPRV
VCCGIINRGA ALFDGKVFRT TLDANVIALD AKTGKELWRQ KAADIKEGYS MTVAPLVADG
VVITGISGAE FGTRGFIDGW DPATGKHLWR THTVPTPDEP GGDTWKGDTW KLGGGSTWIT
GSYDPEQNTV FWGVGNPGPF NAAVRPGDNL YTCSVLALDP KTGKMKWHFQ FSPNNPFDYD
AVAEMVLADM NVEGKPTKVL MNANRNGFFY VLDRSNGKLL AANPYVKVNW ASSIDLKTGK
PVETDVTRDA REGKKVTVYP SILGGKNWQP MSFNPQTGLA YANTLVFGGH YKTEPATYKA
GEWYLGMDLT DLWDWPEGPR GQLKAIDPMT GKTKWEQPSD IPRFSGVLST AGGVVFSGKL
TGEFEAFDAD SGKKLWQFQT GSGIEGQPVT WQQDGVQYVA VTSGYGGVYS LFSGDERLAN
VPAGGSLWVF AVKN
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