Gene BBta_5945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5945 
Symbol 
ID5153216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6159856 
End bp6161058 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content68% 
IMG OID640560668 
Producthypothetical protein 
Protein accessionYP_001241790 
Protein GI148257205 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGAC TTGTGGTCCT GGGAGTTCTG GCCCGATGCC TGATCGGCGC GATCGGCCTC 
TTTGCGACCG CGGCGCACGC CGCGGAGCCC GTCGACATTG CGATCGGCTA TCTCGGCCGC
GCCGGCGCGC CGCAGACCTT GTCGCCGCTC GACCAGCCGG CGCCCGATGA CGGCGTGGCC
GGCGCGCGGC TCGCCATTGA GGACAACAAC ACCACCGGCA AATTCCTCAA CCAGCGCTTC
ACCCTGATCG ATCGTCGCGT GAAGGACGAC GAGGACGCCG CACAGGCCGC CAATGAGCTG
GCCGGCAAGA CCGGCTTCAT CCTCGCCGAC CTGCCGGCCG ATACGCTGCT CAAGGTTGCT
GATGCCTTGC GCGGACGCGG CACCACCCTG CTCAATGTCG GTTCAACCGA CGATCGGCTG
CGCGAGCAGG ATTGCCGCGC CAACGTGCTC CATGTCGCGC CGACGCGCTC GATGCTGGCC
GATGGCCTGG CGCAATATCT GGTCTGGAAG CAATGGAAGC GCTGGCTGCT CGTCACCGGC
TCACATGACA ATGACAAACT GTTCGCCGAC GCGCTGCGCC GCGCCGCCAC CCGCTTCGGC
GCCAAGATCG TCGAGGAGCG CAGCTTCGAG GACACGGGCG GCGCCCGCCG CACCGATTCC
GGCGTCACCC TGATCCAGCG CCAGATGCCG GTGTTCACGC AGAAGGCGCC GGCCTATGAC
GTCCTCGTCG CCGCCGATGA GAGCGAGGTG TTCGCCAACT ATCTGCCCTA CCGCACCTGG
GATCCGCGCC CGGTCGCCGG CTCCGCGGGA CTGCGGCCCA CCAGCTGGGA CCCGGCGCAG
GACCAATGGG GCGCGACGCA GTTGCAGAAC CGCTTCATGA AGCTGGCCTC GCGCCGCATG
GACGCCCTGG ACATGCAGGC CTGGATGGCC GTGCGCATGG TCGGCGAGGC GGCCTCGCGC
ACCAATTCCG GCGACGCCAA GGCGATGGCC GACTACCTCA AGGGCCCGAA CTTCACCATC
GCCGCCTTCA AGGGCACGAG GCTCTCCTTG CGCGACTGGA ACCTGCAACT GCGCCAACCG
ATCCTTTTGG CCGACGGCCG CATGATCGTC TCGGTCTCGC CGCAGGAAGG TTTCCTGCAC
CAGGTCTCCG AGCTGGACAC GCTCGGCGTC GACCGCCCCG AAACCAAGTG CAAGCTGCAA
TGA
 
Protein sequence
MGGLVVLGVL ARCLIGAIGL FATAAHAAEP VDIAIGYLGR AGAPQTLSPL DQPAPDDGVA 
GARLAIEDNN TTGKFLNQRF TLIDRRVKDD EDAAQAANEL AGKTGFILAD LPADTLLKVA
DALRGRGTTL LNVGSTDDRL REQDCRANVL HVAPTRSMLA DGLAQYLVWK QWKRWLLVTG
SHDNDKLFAD ALRRAATRFG AKIVEERSFE DTGGARRTDS GVTLIQRQMP VFTQKAPAYD
VLVAADESEV FANYLPYRTW DPRPVAGSAG LRPTSWDPAQ DQWGATQLQN RFMKLASRRM
DALDMQAWMA VRMVGEAASR TNSGDAKAMA DYLKGPNFTI AAFKGTRLSL RDWNLQLRQP
ILLADGRMIV SVSPQEGFLH QVSELDTLGV DRPETKCKLQ