Gene BBta_5923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5923 
SymbolnifK 
ID5153007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6138114 
End bp6139673 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content62% 
IMG OID640560648 
Productnitrogenase molybdenum-iron protein beta chain, nifK 
Protein accessionYP_001241770 
Protein GI148257185 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01286] nitrogenase molybdenum-iron protein beta chain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGT CTGCCGAACA TGTGCTCGAT CACTTCGAGC TTTTCCGTGG TCCCGAATAC 
CAGCAGATGC TGGCCAACAA GAAGAAGATG TTCGAGAACC CGCGCGATCC CGCGGAAGTC
GAGCGCATCC GCGAATGGGC CAAGACGCCC GAATATCGCG AGAAGAATTT CGCCCGCGAG
GCGCTGACGG TCAATCCGGC CAAGGCCTGC CAGCCGCTCG GCGCGGTGTT CGTCGCCGTC
GGCTTCGAAA GCACGTTGCC GTTCGTGCAC GGCTCGCAGG GTTGCGTGGC CTATTATCGC
AGCCATCTGT CGCGCCACTT CAAGGAGCCG AGCTCCTGCG TGTCGTCGTC GATGACCGAG
GACGCAGCCG TGTTCGGCGG CCTCAACAAC ATGATCGACG GTCTCGCCAA CGCCTACAAC
ATGTACAAGC CGAAGATGAT CGCAGTGTCG ACCACCTGCA TGGCGGAAGT CATCGGTGAC
GACCTCAACG CCTTCATCAA GACGTCCAAG GAGAAGGGCT CGGTTCCGGC CGAGTTCGAC
GTTCCCTTCG CCCACACACC CGCCTTCGTC GGCAGCCACG TCACCGGCTA CGACAATGCG
ATGAAGGGCA TTCTCGATCA CTTCTGGGAC GGCAAGGCCG GCACCGCGCC GAAGCTGGAG
CGTGTTCCCA ACGAGAAGAT CAACTTCATC GGCGGCTTCG ACGGCTACAC CGTCGGCAAT
CTGCGCGAAG TGAAGCACAT CTTCGAGGAG ATGGGGATCG AGTACACCAT CCTCGGCGAC
AATTCGAACG TGTTCGATAC GCCGACCGAC GGCGAGTTCC GTATGTATGA GGGCGGTACC
ACCCTGGAAG ACGCGGCCAA CGCCGTTCAC GCCAAGGCGA CGATCTCGAT GCAGCATTAC
TGCACCGAGA AGACGCTGCC CTTCATCGCC AATCACGGCC AGGAAGTGGT CTCGTTCCAT
CACCCGGTCG GCGTGTCCGG CACCGACGCC TTCGTGATGG CGCTGTCGCG CATCTCGGGC
AAGGAGATCC CGGAATCGCT CGCCCTCGAG CGCGGCCGGC TGGTCGACGC CATCGCGGAC
TCCAGCGCCC ATATCCATGG CAAGAAGTTC GCGATCTATG GCGATCCGGA CCTCTGCCTC
GGCCTCGCCT CGTTCCTGCT CGAACTCGGC GCGGAGCCGA CCCATGTGCT CGCCACCAAC
GGCAACAAGG AATGGGCCGA GCGGGTGCAG GCGGTGTTCG ATGCCTCGCC GTTCGGCAAG
AACTGCCATG TGTATCCCGG CAAGGATCTC TGGCACATGC GCTCGCTGCT GTTCACCGAG
CCGGTCGACT TCCTGATCGG CAACACTTAC GGCAAATATC TGGAGCGCGA CACCGGCACG
CCGCTGATCC GCATCGGCTT CCCGATCTTC GATCGCCACC ACAAGCACCG CTACCCGGTG
TGGGGCTATC AGGGCGGCCT CAACGTGCTG GTCACGATCC TCGACAAGAT CTTCGACGAG
ATCGACCGCA ACACCAACGT GCCGGCCAAG TCGGACTACA GCTTCGACAT CATTCGCTAA
 
Protein sequence
MTQSAEHVLD HFELFRGPEY QQMLANKKKM FENPRDPAEV ERIREWAKTP EYREKNFARE 
ALTVNPAKAC QPLGAVFVAV GFESTLPFVH GSQGCVAYYR SHLSRHFKEP SSCVSSSMTE
DAAVFGGLNN MIDGLANAYN MYKPKMIAVS TTCMAEVIGD DLNAFIKTSK EKGSVPAEFD
VPFAHTPAFV GSHVTGYDNA MKGILDHFWD GKAGTAPKLE RVPNEKINFI GGFDGYTVGN
LREVKHIFEE MGIEYTILGD NSNVFDTPTD GEFRMYEGGT TLEDAANAVH AKATISMQHY
CTEKTLPFIA NHGQEVVSFH HPVGVSGTDA FVMALSRISG KEIPESLALE RGRLVDAIAD
SSAHIHGKKF AIYGDPDLCL GLASFLLELG AEPTHVLATN GNKEWAERVQ AVFDASPFGK
NCHVYPGKDL WHMRSLLFTE PVDFLIGNTY GKYLERDTGT PLIRIGFPIF DRHHKHRYPV
WGYQGGLNVL VTILDKIFDE IDRNTNVPAK SDYSFDIIR