| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5904 |
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| Symbol | nifB |
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| ID | 5152138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6124611 |
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| End bp | 6126173 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640560630 |
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| Product | nitrogenase FeMo cofactor biosynthesis protein NifB |
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| Protein accession | YP_001241752 |
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| Protein GI | 148257167 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGT CAGTGCAGCA CGAACAGGCG ACGATACCGG ACGGCGACAA GCTGAGCTCG
GTGATGCAGA CCATCGCGGA GCACAAGGGC TGCGGCACCT CGGGCGGCAG CGGCAAGGCG
AGCTGCGGCT CGGGTGCCGG CGAGAACGAC CTGCCGCCGG AGATCTGGGA GAAGGTGAAG
AACCATCCCT GCTACAGCGA AGAGGCGCAT CATCACTATG CGCGCATGCA TGTCGCCGTG
GCGCCGGCCT GCAACATTCA GTGCAACTAC TGTAACCGCA AATACGACTG CGCCAACGAG
TCGCGTCCGG GCGTGGTCAG CGAGAAGCTG ACGCCCGAGC AGGCCGCCAA GAAGGTGCTC
GCCGTCGCCT CGACCATTCC GCAGATGACC GTGCTGGGCA TCGCCGGCCC CGGCGATCCG
CTCGCCAACC CCGAGAAGAC CTTCAAGACC TTCGAGCTGA TCGCCCGCAC CGCGCCCGAC
ATCAAACTGT GCCTGTCGAC CAATGGCCTG GCGCTGCCCG ACCATGTCGA CACCATCGCC
GGCTTCAATG TCGACCATGT CACGATCACC ATCAACATGG TCGATCCCGA GATCGGCGCC
AAGATCTATC CCTGGGTGTT CTGGAAGCAC AAGCGCTACA CCGGCGTCGA GGCGGCCAAG
CTGCTGACCG ACCGCCAGCT GCAGGGCCTG GAGATGCTCA CCGAGCGCGG CATCCTCTGC
AAGGTCAACT CGGTGATGAT CCCCGGCGTC AACGACAAGC ACCTGGTCGA GGTCAACCGA
GCAGTGAAGT CGCGTGGCGC CTTCCTGCAC AATATCATGC CGCTGATCTC CTCGCCCGAG
CACGGCACCG TGTTCGGCCT GACCGGCCAG CGCGGCCCGA CCGCGCAGGA GCTCAAGGCG
CTGCAGGACG AGTGCGAAGG CGAGATGAAC ATGATGCGGC ATTGCCGCCA GTGCCGCGCC
GACGCCGTCG GCCTGCTCGG CGAGGACCGC TCCGCCGAGT TCACCACCGA CAAGATCATG
GCGATGGAGG TGAACTACGA CATCGACAGC CGCAAGGCCT ATCAGGAGGC TGTCGAGAGC
GAGCGCGTCG CCAAGGTCGT CGCCCGGCAG GAGGAGCTGG CCTCGCTTGC CGGCCAGTCC
AGCGACATCA AGCTGCTGGT GGCCGTCGCG ACCAAGGGCT CGGGCCTGAT CAACGAGCAT
TTCGGCCATG CCAAGGAGTT CCAGGTCTAC GAGCTCTCGA CGGCTGGAGC GAAGTTCGTC
GGTCATCGCC GCGTCGATCT GTACTGCCAG GGTGGCTATG GCGACGAGGA CAGCCTGGAA
ACCGTGATCC GTGCCATCAA CGACTGCCAT GCGGTGTTCG TGGCCAAGAT CGGCGGCTGC
CCGAAGAGCG ACCTGCAGGC CGCCGGTATC GAGCCGGTCG ATCAGTTCGC TCATGAGTTC
ATCGAGAAAT CGGCGATCGC CTGGTTCAAG AGCTATCTCG ACAAGGTCAA CAGCGGCGAG
ATCCAGCACG TCGTGCGCGG CGACGCCGAG ATCCGCCAGG GCGCTCTGAT CTCGGCAGCG
TAA
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| Protein sequence | MDASVQHEQA TIPDGDKLSS VMQTIAEHKG CGTSGGSGKA SCGSGAGEND LPPEIWEKVK
NHPCYSEEAH HHYARMHVAV APACNIQCNY CNRKYDCANE SRPGVVSEKL TPEQAAKKVL
AVASTIPQMT VLGIAGPGDP LANPEKTFKT FELIARTAPD IKLCLSTNGL ALPDHVDTIA
GFNVDHVTIT INMVDPEIGA KIYPWVFWKH KRYTGVEAAK LLTDRQLQGL EMLTERGILC
KVNSVMIPGV NDKHLVEVNR AVKSRGAFLH NIMPLISSPE HGTVFGLTGQ RGPTAQELKA
LQDECEGEMN MMRHCRQCRA DAVGLLGEDR SAEFTTDKIM AMEVNYDIDS RKAYQEAVES
ERVAKVVARQ EELASLAGQS SDIKLLVAVA TKGSGLINEH FGHAKEFQVY ELSTAGAKFV
GHRRVDLYCQ GGYGDEDSLE TVIRAINDCH AVFVAKIGGC PKSDLQAAGI EPVDQFAHEF
IEKSAIAWFK SYLDKVNSGE IQHVVRGDAE IRQGALISAA
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