| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5842 |
|---|
| Symbol | phnM |
|---|
| ID | 5149768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6081328 |
|---|
| End bp | 6082485 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640560569 |
|---|
| Product | putative metal-dependent hydrolase involved in phosphonate metabolism |
|---|
| Protein accession | YP_001241691 |
|---|
| Protein GI | 148257106 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
|---|
| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA ACATGTCCGA CACGGTATTA GGCAATGCCA GGCTGGTCCT CGCGGATCGG
GTCATTGAGC AGGGCTGGGT GGCCGTTGCC GCTGGCAGGA TCGTCGAGTT CGGCGAAGGC
GATGCACCGG CCGGCAGTCT TGACGTCGAG GGCGATCTGC TGATGCCGGG CCTCGTCGAG
CTGCATACCG ATCACCTCGA GGCCCACGTC GTACCGCGCC CGAAGGTGCA TTGGGATCCC
GTTGCGGCAG TCATCTCCTA TGACGCGCAG CTGGCGACCG CCGGCATCAC CACGGTTCTC
GACTCCTTGC GCGTGTGGAC CGAGGATGGC ACCGAAGGCG TCGATGGTCA GGCCAATATG
CTGGCCGAGG CGATCGCGAC GGCCCGCGAT GGCGGACTGC TGCGCTCCGA CCACTTCCTG
CATCTGCGCT GCGAGGTGCC GATGCCCACG GTGGTCGAGG AGGCGCGGCA GCTGGCGGGG
CGCCCTGACG TGCGGCTGAT GTCGCTGATG GACCACACGC CGGGCCAGCG GCAGTTCCGC
GACGAGGGCA AGCTGCGCGA CTACTACCGT GGCAAGAGCG GCGGCAAGAC GGACGCGGAG
CTCGACGTGA TGTTCGCGCG ACGGTTTGCG TATCAGCAGG CCTATGCTGC GCCGAACATC
CGCGACATCG TTGCGCTGGC CAAGACCCAT GACGTGCCCT TGGCCAGTCA CGACGACACC
ACCGAGGAGA ATGTTGCGGA CGCGATCAAG GACGGCATCG CGGTCGCCGA ATTTCCGACC
ACGATCGAGG CGGCGCGTGG CCTGCACGAG GCGGGCATCA GCATTTTGAT GGGGGCGCCG
AACGTCGTTC GCGGCGGCTC GCACTCCGGC AATATCGCGG CGGTCGACCT CGCCCGCGAG
GGTCTGCTGG ACATCCTGTC GTCGGACTAT GTGCCGTCGA GCCTGCTGAT GGGCGCGCTG
CAGCTGCCGC AGCGAGTGCC GGCCATCGAT CTCGCCGCCG CCGTGCGCAC GGTGACCAAG
GCTCCCGCCG ACGCCGTCGG CCTGCATGAT CGCGGCGAGA TCGCCGCGGG CAAACGGGCC
GACCTGATCC GCGTTCGTGT CGCGGGCCAG TTGCCGGTGG TGCGCAGCGT CTGGCGAGAA
GGATTGCGGG TGGCATGA
|
|---|
| Protein sequence | MSANMSDTVL GNARLVLADR VIEQGWVAVA AGRIVEFGEG DAPAGSLDVE GDLLMPGLVE
LHTDHLEAHV VPRPKVHWDP VAAVISYDAQ LATAGITTVL DSLRVWTEDG TEGVDGQANM
LAEAIATARD GGLLRSDHFL HLRCEVPMPT VVEEARQLAG RPDVRLMSLM DHTPGQRQFR
DEGKLRDYYR GKSGGKTDAE LDVMFARRFA YQQAYAAPNI RDIVALAKTH DVPLASHDDT
TEENVADAIK DGIAVAEFPT TIEAARGLHE AGISILMGAP NVVRGGSHSG NIAAVDLARE
GLLDILSSDY VPSSLLMGAL QLPQRVPAID LAAAVRTVTK APADAVGLHD RGEIAAGKRA
DLIRVRVAGQ LPVVRSVWRE GLRVA
|
|---|
| |