Gene BBta_5834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5834 
Symbolqor 
ID5150541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6076474 
End bp6077448 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID640560562 
Productquinone oxidoreductase (NADPH 
Protein accessionYP_001241684 
Protein GI148257099 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.487323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.847734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCG CCATTCGCTT CCACAAGACC GGCGGTCCCG AAGTTCTGGT CTGGGAGGAC 
GTCACCGTCG GCAAGCCCGG GCCCGGCGAA GCCCGCATCC GTCACACCGC GGTAGGGCTC
AATTTCGTCG ATATTTACAA CCGTTCCGGC CTCTATCCCG TCCAGCTGCC GAGTGGACTT
GGCAGCGAAG GCGCGGGGGT CGTCGAGGAA CTGGGGGAGG GGGTCACCGA TCTCAAGGTC
GGCGACCGCG TCGCCTATGG TTCGTCACCG CTCGGCGCCT ATTCCGAGGC GCGGCTCATT
CCGGCCGCGC AATTGCTGAA GCTGCCGGAC GGGATCGACG ACAAGACCGC CGCGGCCATG
ATGCTCAAGG GCCTGACGGT CCAATACCTG ATCCGTCAGA CCTACCGGGT CAAGGCTGGC
GAGACGATTC TGCTCCACGC GGCGGCGGGC GGCGTCGGCC TCATTCTCAG CCAGTGGGCC
AAGCATCTCG GCGCCTCGGT AATCGGCACC GTCTCCAGCG ACGAGAAGGC CGAGCAGGCC
AGGGCCCATG GCTGTGATCA CACCATCGTC TATTCGCGCG AGGATTTCGT CGCACGCGTC
GGCGAGATCA CGGCGGGCAG GAAGGTGCCG GTGGTCTATG ATTCCGTCGG CAAGGATACG
TTCCTGAAGT CGCTCGATTG CCTCGCGCCG CTCGGCTACG CCGTGCTGTT CGGCCAGTCA
TCCGGCACGG TCGATCCGCT GAATCTCGGC CTCCTTGCCC AGAAAGGCTC GCTGTTCGTG
ACCCGGCCGA CCCTGTTCAC CTACGCGGCC AAGCGCGAGA ATCTGGTGGC CATGGCGAAC
GAGCTGTTCG ATGTCGTCAA GTCGGGGGCG GTGAGGATCG AGGTGAACCA GACCTATCCA
CTCAAGGACG CCGCCAAGGC TCACGCCGAC CTCGCCGCTC GCAAGACCAC CGGATCGACG
GTGTTCCTGG TCTGA
 
Protein sequence
MTSAIRFHKT GGPEVLVWED VTVGKPGPGE ARIRHTAVGL NFVDIYNRSG LYPVQLPSGL 
GSEGAGVVEE LGEGVTDLKV GDRVAYGSSP LGAYSEARLI PAAQLLKLPD GIDDKTAAAM
MLKGLTVQYL IRQTYRVKAG ETILLHAAAG GVGLILSQWA KHLGASVIGT VSSDEKAEQA
RAHGCDHTIV YSREDFVARV GEITAGRKVP VVYDSVGKDT FLKSLDCLAP LGYAVLFGQS
SGTVDPLNLG LLAQKGSLFV TRPTLFTYAA KRENLVAMAN ELFDVVKSGA VRIEVNQTYP
LKDAAKAHAD LAARKTTGST VFLV