Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5821 |
Symbol | |
ID | 5150556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6065759 |
End bp | 6067057 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640560549 |
Product | major facilitator superfamily permease |
Protein accession | YP_001241671 |
Protein GI | 148257086 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.836569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.302155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGTGC TCGGACAACA CGCCGTATCC TCATCCTCGT CGCCGATCAG GCTGCTAGAT CGCACCTATG TTGCGTGGGG AACGGTCGCA TTCGCCTATG CGATCGCATT TCTGCAGCGG ATGTCGCCGC AGACCGTCGG CCTGAGCTTC ATGCGCGATT TCGGCACCGA CGCTTCGGGT GTCGCGATGC TCGCCTCCAG CTATTTCTGG GGCTACACGT TGATGCAGAT TCCGGCTGGT CTGCTGGTCG ATCGCTACGG CGTCAAACGC GTCGTGCTGT GCAGCATGGC GGCATCGGTG GTCGGCAGTC TCGCATTCGC GCTCTCGCCC ACCCTGTTCG ACGTCTTCAT AGCCCGCGTG ATTGTGGCCT GCGGCGACGC GCTCGTATTC ACCGCGTTGC TGAAGCTGGT CGCGCAGAGC TTTACAGACG AGCGTTTCGG CCTGATGTCC GGGATCTCCC AAGTCTCTGG CTATGCGGGC GGCGTCATCG CAACCACGCC GCTCGCAGCC GCCGTCAGCG GCTTCGGTTG GCGTGCCTGC TTCTTCTTCA TCGCCTGTAT CGGGATCGCC AACCTGGCAT GCGCCTCGGT GGCGCTGAAG GCCGCGCCAT CGAACAACAA TGGAAGGACG CTGAAGAGCG TCCTGCTGGC GAGTTGGCAG GCGCTCAGAT CAGCCGCGAA TTGGGGCTGC GCGATGAGCT TCGCGTCGCA TTTCGCGGTG GTCACGACCC TGGCTGGCGT GTGGGGCATT CCGATGGTGT CGCATTATTT CGGCATTTCA CCGTCGGCCG CCGGCGCCCC CCTGCTCGCC TTCATGGTCG GAAATGCGAT CGGATCCATC TTTCTCGGCC ATGCTGCCGA CCGGACGCGG TCGCTGGACT CGGCCTTGAT ACGCATCAGC CTGCTTCGCA TGCTGCTTGT CGCGATGCTG TGGCCGGCTC TCGCTCATGC ATTTGGCCTT GTCTATGTGG GCGTGGTGTT TGCCGTGCTG GGCCTGGTCG CAGGCGGCAC GGTTCCCCTG ATCCTGAAAT GCACGAAGCA TCTCTACACG GTGGAACGTA TCGGTGTCGG GGCCTCGATC AACACAACCT CGGCAGGCGT GTTCGCAGGA CTCGCGCAGC CCGTCATCGC CTTCGCGATG ATGGCCGCAA GCGGACTTGG TGCCGGTGAT GGCTCAAGCC TGCACGCCGT CGCAAACGAC GCCGGCTACG CGACCCTGCT GGCAGCTCTT CTGCTGATGT CCCTGCCGGG CATTTTCGGA CCACTGATGA TGAGGCCCAG ACTGACACCG AGTACTTAA
|
Protein sequence | MAVLGQHAVS SSSSPIRLLD RTYVAWGTVA FAYAIAFLQR MSPQTVGLSF MRDFGTDASG VAMLASSYFW GYTLMQIPAG LLVDRYGVKR VVLCSMAASV VGSLAFALSP TLFDVFIARV IVACGDALVF TALLKLVAQS FTDERFGLMS GISQVSGYAG GVIATTPLAA AVSGFGWRAC FFFIACIGIA NLACASVALK AAPSNNNGRT LKSVLLASWQ ALRSAANWGC AMSFASHFAV VTTLAGVWGI PMVSHYFGIS PSAAGAPLLA FMVGNAIGSI FLGHAADRTR SLDSALIRIS LLRMLLVAML WPALAHAFGL VYVGVVFAVL GLVAGGTVPL ILKCTKHLYT VERIGVGASI NTTSAGVFAG LAQPVIAFAM MAASGLGAGD GSSLHAVAND AGYATLLAAL LLMSLPGIFG PLMMRPRLTP ST
|
| |