| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5742 |
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| Symbol | |
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| ID | 5155499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5996794 |
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| End bp | 5997792 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640560478 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) |
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| Protein accession | YP_001241600 |
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| Protein GI | 148257015 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.551503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC GCAATTTCGT AAAACTAACA GCCGGTCTCG CCGGGACAGT CGCGCTTCTG
CCATTCTCGG CCGCGCACGC CCAGTCGAAG GCGGTGTTCA AGGCCTCCGA CGTTCAGCCC
CCCGGCTATC CGACGGTTGC GGCTACCGAA AATCTCGGCA AGAAGCTCGC AGCCGCCACC
AATGGCCGGC TGACACTTCA GATGTACCCC TCCGCACAAC TCGGCGGCGA GAAGGAGACC
ATCGAACAGA CCCAGATCGG CGCAATTCAG ATGCTGCGCG TCAGCGCCGG CGCATTGGGG
CCGATCGTCG ATGAGGTCAA CGTCGTCAAC ATGCCGTTCT TGTTCAAGAG CATCGAACAC
TCCGAGAAGA TGATGGACGG CCCGATCGGA CAAGATCTGC TCGACCGCAT CAGCGCCAAT
CCGGGCGCAA ATCTGGTTGC ACTTTGTTGG ATGAACTCCG GTGCACGCAG CATCTACAAC
ACAAAAAAGC CGATCAGAAC GGTCGAGGAC ATCAAAGGTC TGAAGATCCG GGTGATCGGA
AACCCGATCT TCATCGATAT GATGAACGCG CTCGGCGGCA ACGGTGTCGC GATGGGCTAT
GATCAGGTCT TCAGCGCGTT GCAAACAGGC GTGATCGACG GTGCCGAGAA CAATCCTCCG
AGTTACGTTT TCAGCAACCA TTATACCGCG GCCAAGTATT ACTCGTTGAC GCAGCATCTG
GTCATTCCAG AAGTTCTTGT TTTCTCGAAG CGCGCCTGGA CGAACCTTTC GACTGACGAC
CAGGCTCTGA TCAGGAAGTT CGCGCGCGAG GCTCAACTGG AAGAGCGCGA GCTTTGGAAG
GCCTATGAGC GCGAGGCCAT GGAGAAAGCC AAGGCAGCCG GCGGCGAGAT CATCGAGATC
GCCGACAAGA CGCCGTTCCA GAAGGCCGTC AAACCGGTCT GGGACAAATA TGGCCCGAAG
TATCAAGACA TGATCAAGCG CATTCAAGAG ATCGCGTAA
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| Protein sequence | MKRRNFVKLT AGLAGTVALL PFSAAHAQSK AVFKASDVQP PGYPTVAATE NLGKKLAAAT
NGRLTLQMYP SAQLGGEKET IEQTQIGAIQ MLRVSAGALG PIVDEVNVVN MPFLFKSIEH
SEKMMDGPIG QDLLDRISAN PGANLVALCW MNSGARSIYN TKKPIRTVED IKGLKIRVIG
NPIFIDMMNA LGGNGVAMGY DQVFSALQTG VIDGAENNPP SYVFSNHYTA AKYYSLTQHL
VIPEVLVFSK RAWTNLSTDD QALIRKFARE AQLEERELWK AYEREAMEKA KAAGGEIIEI
ADKTPFQKAV KPVWDKYGPK YQDMIKRIQE IA
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