Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5741 |
Symbol | |
ID | 5155498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5996046 |
End bp | 5996732 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640560477 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001241599 |
Protein GI | 148257014 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0911809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCA ATGGTCGGCC GCGGGGCGCA ACAGCCGCTT CGCGCATCTA TGCCGATCTG AGGGCCGAGC TCGTGTCGCT GGTCCGTCGA CCAGGTGAGC CGATCTCGGA GGCGCAGATC GCGACCGCCT ACGGCGTCAG CCGAACGCCG GTGCGTGAAG CCATCCTGAA GCTCTCGGAT GAGGGGCTGG TGGAGATATT TCCCCAGTCG GGCATTTTCG TTTCGCGCAT TCCTGTCGCG GCGCTTCCCG AGACCATCAT CATCCGCAAG TCCCTTGAGG AAACCACGGC CCGGATGGCC GCCGAGCACG CGACCTCCAG CCAGCTCCTG AACCTGCACG CGACGCTCGA ACGCCAGCGC GAGGCCTGCG CTGCGAAGGA CCGAGAAGCC TTTCATCAAG CGGACGAGAT GTTTCATGCG GGGATCGCTG AGGTTGCGGG CTATCCTGGA ATATGGAAGC TGATCCTGCA AGTGAAGGTT CATGTCGATC GGTATCGACG CCTGACCCTG CCTCAGATCG GACGGATGGC GGAGGTCATC GCCGAACATG AACCGATTCT GGAGGGGATC GAGCGGCGCG ATCCGGAACG AGCCCGCGCC GCCATGGCCA GTCATTTGGA ACGACTGCTC GACGACATCT CTGAAATTCA GAATCTCAAT CCAGATTATT TCGATCAGCC GACATAG
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Protein sequence | MRRNGRPRGA TAASRIYADL RAELVSLVRR PGEPISEAQI ATAYGVSRTP VREAILKLSD EGLVEIFPQS GIFVSRIPVA ALPETIIIRK SLEETTARMA AEHATSSQLL NLHATLERQR EACAAKDREA FHQADEMFHA GIAEVAGYPG IWKLILQVKV HVDRYRRLTL PQIGRMAEVI AEHEPILEGI ERRDPERARA AMASHLERLL DDISEIQNLN PDYFDQPT
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