Gene BBta_5710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5710 
Symbol 
ID5156120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5958561 
End bp5959394 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID640560447 
Productputative uroporphyrinogen-III synthase 
Protein accessionYP_001241569 
Protein GI148256984 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACC GGCTGACCGG CAACCGCATC CTGATCCTGG AAACCCGCGA GGAGGCGCAG 
TTCTCCCGGC TGCTCGCCGA GCAAGGCGCC GACGTGCTGC AATGTCCGAT GTTCACGATC
CAGGACGCGC CGGACCCGGC TCCGGTCGAG GCCTGGATCC ATCGCTGCAT CGAACGGCCG
CTTGACGATC TGGTGTTGAT GACCGGCGAG GGGTTGCGGC GGCTGATGAC GGTGGTGCGC
CGAATCGGCG TCGAGCCCGC ATTCATCGCG GCGCTGGGCA AGGCCCGCAA ATTCACCCGC
GGGCCGAAGC CGGGGCGCGC CTTACGCGAG CTCGGGCTCG AGTCCCAGGT GACGACCGAG
AAACCGACGT CGGAAGGCGT CGCCGAACTG CTGGCGCGAT ACGATCTGAA AGGCCATCGC
CTTGGCTTGC AGCTCTATCC CGACAAGGAT CATTCGGCGC TGATCGGCGC CATCCAGGCG
GAAGGGGCCG ACGTCGACCC GGTGCTGCCC TATGTCTATG ATGCCAAGGC GGCGGACGCG
AACATCCTGA CCGCGATCGA CGAGATGACC GCCGGCAAGG TCGATGCGAT CGCACTGACC
AGCTCCGGCC AGCCGCGTCG GCTGTTCGAC GTCGCCAAGG CGCATGGCGT CGAGGACCGG
CTGCGACAGG GTCTGGCGCG CACGCAGATT GCGTCCGTGG GGCCCGTGGT GACGGAGGAG
CTCGCCGCGC ACGGGCTTGC GCCATCGATC GTGCCGGCGG GAGAGGCCTA TTTCATGAAG
CCGCTGATCT CGGCGATGGC GACGGCGCTG GGTGTGAAGG CGCAGCGGAC CTGA
 
Protein sequence
MADRLTGNRI LILETREEAQ FSRLLAEQGA DVLQCPMFTI QDAPDPAPVE AWIHRCIERP 
LDDLVLMTGE GLRRLMTVVR RIGVEPAFIA ALGKARKFTR GPKPGRALRE LGLESQVTTE
KPTSEGVAEL LARYDLKGHR LGLQLYPDKD HSALIGAIQA EGADVDPVLP YVYDAKAADA
NILTAIDEMT AGKVDAIALT SSGQPRRLFD VAKAHGVEDR LRQGLARTQI ASVGPVVTEE
LAAHGLAPSI VPAGEAYFMK PLISAMATAL GVKAQRT