Gene BBta_5611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5611 
Symbol 
ID5155091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5839949 
End bp5841478 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content67% 
IMG OID640560354 
Productputative virulence factor MviN-like protein 
Protein accessionYP_001241476 
Protein GI148256891 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0199453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.111663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGAC GGATCTTCAC GGTTGGTGGC TATACGCTGC TGTCGCGGCT CACCGGCTTT 
GCCCGCGACA TCATGCTGGC GGCGATACTT GGCGCCGGGC CGGTGGCGGA CGCGTTTTTC
ATTGCGTTCC GGCTGCCGAA CCATTTTCGG GCGATCTTTG CCGAGGGCGC GTTCAACGCC
GCTTTCGTGC CGGCCTATGC GCATGTCCAT GGCGAGAAGG GGCCGGCACA GGCCGGCCTG
TTTGCCGACC GCATCTTCAC TTTGCTGCTG GCCTCGCAAA TCGTGCTGCT GATCCTGGCC
TGGGCCTTCA TGCCGCAGGC CATGACGGTC CTGGCGCCTG GCTTCACCGA CGATCCGGCA
CAGCGCGAGC TTGCCATCAC GCTCACCCGC ATCACCTTTC CCTATCTGCT CTTGATCACG
CTGGTGACGC TGTATGGCGG CATGCTCAAC GTGATGCAGC GCTTCGCCAG CGCCGCGGCG
GCCTCGATCT TCCTCAACCT CGCGATGATG GCGACCCTGG CGCTGGCAGC GTTCTTCCCC
GGCGTGGGCC ATGCCGCGGC CTGGGGCGTG CTGATCTCGG GCTTCCTGCA GTATTTTCTG
CTCGCCGGCG ATCTCGCCCG CCATGGCGGT CTGCCGCGCT TTGCGTCGCT CAAGCTCGAC
GACGACATCC GCGCCTTCTT CCGCGCGCTG GGACCGGCCA CGTTGGGCTC GATGGGCACG
CAGGTCGCGA TGTTCGCCGA CACCATCATC GCGACGTTCC TCCCCGCCGG CGCGATCTCG
GCGTTGTATT ATGCCGACCG TCTCAACCAG CTGCCGATCG GCGTGATCGG CATTGCCATC
GGCACCGTGC TGCTGCCGGA AATGTCGCGG CGGCTGACGG CTAATGACCA CGAAGGCGCC
ATGGAGCAGC AGCGCCGCGC CTTCGAGTTC ACGCTGTTGT TCTCGGTGCC GTTCGTGGCC
GCCTTCCTCG CCGTGCCCGA TGTCATCACC CGCGCGATGT TCGCGCGCGG CGCCTTCACC
AAGGGCGATG CCGCTGCGGC CGGGGCAACG CTGGCCGCCT ATGCCGTCGG CCTCATTCCC
TTCGTGATGA TCCGCAGCGC GGTCTCGACC TTCTATGCCC GCAAGGACAC CGCGACGCCG
GTCAAGGCGT CGCTGACCGG CCTCACCGTC AACGTGCTGC TCAAAGTGCT GCTGATGGGG
ACCTTGGCCC AGGTCGGGCT GGCCCTGGCG ACGGCGGTCG GCGCCTGGAT CAATCTGCTG
TTGGTGCTCG GATTCGCGGT GCACAAGGGC TATCTGCGGT TCGACCGGCG GCTCACCTCG
TCGCTGCTGA AATTCGCCGT GACCGGCCTC GTGCTCGCCG CGGCCCTGTG GTCGACGGCC
TTCTTCGCGG CGCCTCATCT CGCATTTCTG GGCCGCCTGC AGGACGAGGC CGTGCTCGGC
CTGCTGATCG CGGCCGGCGC CGTCATCTAT GCCGGAGCGA TCCTCGCATT GTTCGGTCCG
CGCTGGCTCA AGGCGCTGGT GCGGCGCTGA
 
Protein sequence
MLGRIFTVGG YTLLSRLTGF ARDIMLAAIL GAGPVADAFF IAFRLPNHFR AIFAEGAFNA 
AFVPAYAHVH GEKGPAQAGL FADRIFTLLL ASQIVLLILA WAFMPQAMTV LAPGFTDDPA
QRELAITLTR ITFPYLLLIT LVTLYGGMLN VMQRFASAAA ASIFLNLAMM ATLALAAFFP
GVGHAAAWGV LISGFLQYFL LAGDLARHGG LPRFASLKLD DDIRAFFRAL GPATLGSMGT
QVAMFADTII ATFLPAGAIS ALYYADRLNQ LPIGVIGIAI GTVLLPEMSR RLTANDHEGA
MEQQRRAFEF TLLFSVPFVA AFLAVPDVIT RAMFARGAFT KGDAAAAGAT LAAYAVGLIP
FVMIRSAVST FYARKDTATP VKASLTGLTV NVLLKVLLMG TLAQVGLALA TAVGAWINLL
LVLGFAVHKG YLRFDRRLTS SLLKFAVTGL VLAAALWSTA FFAAPHLAFL GRLQDEAVLG
LLIAAGAVIY AGAILALFGP RWLKALVRR