| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5609 |
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| Symbol | |
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| ID | 5155512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5837212 |
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| End bp | 5839395 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640560352 |
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| Product | putative TonB-dependent receptor protein |
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| Protein accession | YP_001241474 |
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| Protein GI | 148256889 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.232583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.195075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTT CCGTAACCGC GCTGTGCGCG GCGACGTGCT TTGTCACGTT GTCTTCTCCA
TGTTTCGCCC AGGCCCAGCA GGCCCCGACG CTTCCGACGG TCACCGTCGA CCCGGTCAAG
CGCACCGCCG CGCGCCCCGC CAGACCCGCC ACCGATCGAC CCGCGCCGGG CCCGCGGGTG
CCGCGGGTGG GGGCCGCGCC GCAGACCGCG GCCGCTGGTC CTGCTGGCCC CGCGGGTTCG
GCGCCGAGCC TGACCGCGCC GACCACGCAA ACCGCGACGC AGCGCATCCA GCAGACGCCG
GGCGCGGTCG CCGTCGTGCC CGACACCTCG TTCAGGAATG CTCCGGCTCA GACCATCAAA
GATGTGCTCG ACTACGTGCC CGGCGTGTTC GCGCAGCCGA AATGGGGCGA CGACACACGG
CTGTCGATTC GCGGCTCCGG CCTGTCGCGC AATTTCCATC TGCGCGGCAC CCAGCTCTAT
CTCGACGGCA TTCCGATCAA CACCGCCGAC GGCTATGGCG ACTTCCAGGA GATCGACCCG
ACCGCCTACC GCTATGTCGA GGTCTATAAG GGCGCCAATG CGCTGCGCTA CGGCGCCAAT
TCGCTCGGCG GCGCGGTCAA TTTCGTGACG CCGACGGGGC GCGACGCGTC CGCGTTCGAC
AGCCGGCTCG ACGGCGGCGC CTTCGGCTAT CTGCGCGGGC AGGCCTCGAC TGGCGGCGTC
AGCGGCCCGC TCGATTACTT CGTCACCGGC TCGGCCTCGC GCACGGATGG CTATCGCGAT
CATAGCTGGG GCACGGCCGA GCGCGGCAGC GCCAATGTCG GCTATCAGGT CTCGCCGGAT
TTCGAGACCC GCTTCTATCT GAATGCCAAC TCGGTGCGGC AGCGCATCCC GGGCGAGGTG
ACCAAGACCA GCGCGCTCAA CTCGCCGCAG ACCGCTGCGG CCAACAACGT CCTCAACGAC
TGGCAGCGCA ACATCGACAC GGTCCGGGTC GCCAACAAAT CGACCCTCCG GCTCGACAAC
ACCGACATCG AGTTCGGCGT GTTCGCGGTC GACCGGCATT TGATGCATCC GATCTTCCAA
TGGCTCGACT ACCGCTATCA CGACTATGGC GGCTTCGTGC GCGCCGTCGA CGACCGGGAG
ATCGGCGGCC ATCGCAACCG CTTCACGGTC GGGCTCAACA TCCAGAACGG CACGACGGAC
GCGAATCAGT ACGTCAACAT CGGCGCCAAC AAGGGCGCGC AGACGCTCGC GGCCGTGCAG
CGTCCCGAGA ACTACACCCT CTATGCAGAG AATGCATGGT ACGTCACGCC CGCGGTGTCT
CTGATCGCGG GGGCGCAATA TCTGCATGCC GTGCGCGAGC AGCAGGTCGA CTTCACGACC
AATCCGGCGA CGAAGTCCGG CACCAGCACC TTCGACCTGT TCAGCCCGAA GATCGGCCTG
CTGTGGGATG TCGATCCGGG CTGGCAGGTG TTCGCCAACG TCTCGCGCAG CGGCGAGGCG
CCGAGCTTCG GCGAGGGCAA CGGCACGGCC GTTCCATTCT ACAACATCAA GGCGCAGACG
GCGACGACCT ACGAGATCGG CACGCGCGGC CGGCGTCCCG ACGTCACCTG GGACCTCGCG
CTCTATCACG CCGATATCAA GAACGAGCTG CAGTGCTTCT TCTCGACGTT CGGCACCTGC
AACGTCACCA ATGCCGACAA GACCATGCAT CAGGGCGTCG AGGCCGGGCT CGGCATCAGC
CTGTTCAAGG GATTGGCCGT CAACAGCGAT ACGCCCGACC GGGTCTGGCT CAATCTGGCC
TATACGTACA GCGACTTCCG CTACAGCAAT GATGCGACCT GGGGCAACAA CCGCCTGCCT
GGCGCGCCGC CGCACTTCCT GCGCGCGGAG CTGCTCTACA AGCATCCCGC CGGCTTCGCC
GTCGGCCCGA ATGTCGAATG GGTGCCGGAG TCCTATTTCG TCGACAGCGC CAACACGCTG
AAGACAGAGC CCTATCTGTT GTGGGGCCTG AAGGCGACCT ACGACGATGG CAAGCATTTT
TCGGCCTATC TCGAGGGCCG CAACCTCGCC AACAAGGCCT ACATCGCCAC CACGAGCATC
ATTGATCGCG CGACGGCGAC GTCCACTCTG TTCAATCCCG GCAACGGCCG CGGCGTCTAT
GCCGGCATCC GCTACAAACT GTGA
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| Protein sequence | MSRSVTALCA ATCFVTLSSP CFAQAQQAPT LPTVTVDPVK RTAARPARPA TDRPAPGPRV
PRVGAAPQTA AAGPAGPAGS APSLTAPTTQ TATQRIQQTP GAVAVVPDTS FRNAPAQTIK
DVLDYVPGVF AQPKWGDDTR LSIRGSGLSR NFHLRGTQLY LDGIPINTAD GYGDFQEIDP
TAYRYVEVYK GANALRYGAN SLGGAVNFVT PTGRDASAFD SRLDGGAFGY LRGQASTGGV
SGPLDYFVTG SASRTDGYRD HSWGTAERGS ANVGYQVSPD FETRFYLNAN SVRQRIPGEV
TKTSALNSPQ TAAANNVLND WQRNIDTVRV ANKSTLRLDN TDIEFGVFAV DRHLMHPIFQ
WLDYRYHDYG GFVRAVDDRE IGGHRNRFTV GLNIQNGTTD ANQYVNIGAN KGAQTLAAVQ
RPENYTLYAE NAWYVTPAVS LIAGAQYLHA VREQQVDFTT NPATKSGTST FDLFSPKIGL
LWDVDPGWQV FANVSRSGEA PSFGEGNGTA VPFYNIKAQT ATTYEIGTRG RRPDVTWDLA
LYHADIKNEL QCFFSTFGTC NVTNADKTMH QGVEAGLGIS LFKGLAVNSD TPDRVWLNLA
YTYSDFRYSN DATWGNNRLP GAPPHFLRAE LLYKHPAGFA VGPNVEWVPE SYFVDSANTL
KTEPYLLWGL KATYDDGKHF SAYLEGRNLA NKAYIATTSI IDRATATSTL FNPGNGRGVY
AGIRYKL
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