Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5606 |
Symbol | cycF |
ID | 5155425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5833120 |
End bp | 5833569 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560349 |
Product | cytochrome c, class II |
Protein accession | YP_001241471 |
Protein GI | 148256886 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.325565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGGA CTGTCGTGGC AGCAGCAGCG TTGCTGCTCG GGGCCGGCGC CGTGATGGCA CAGCAGGATC TGGTCAAGCA GAGCCAGGAC ACCATGAAGG CGAACGCCAA GAATCTCGGC GGGGTCCTGA TCGCCATGGT GAAGGGCGAG AAGCCCTACG ACCAGGCCGC CGTCAATGCC GCTCTGGCGC AGCTCGACGA GACCGCCAAG AAGCTGCCGA CGATGTATCC GGCCAGCCTG AAGGCCGCGA AGTTCGAGGG CGATTACGGC CCGTCGCCGA AGATCTGGGA AGACCAGGCC GGCTTCAAGG CCAAGATCGA GAGCTTCGCC AAGGTCGTGA CCGAGGCCAA GGCCAAGATC AAGGATCTCG ACAGCCTCAA GGCGACGGCG CCGGCGATCG GCAAGGAATG TGGCGGCTGC CACGAGACCT TCCGCGTCAA GAACAGCTGA
|
Protein sequence | MKRTVVAAAA LLLGAGAVMA QQDLVKQSQD TMKANAKNLG GVLIAMVKGE KPYDQAAVNA ALAQLDETAK KLPTMYPASL KAAKFEGDYG PSPKIWEDQA GFKAKIESFA KVVTEAKAKI KDLDSLKATA PAIGKECGGC HETFRVKNS
|
| |