Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5600 |
Symbol | thiD |
ID | 5155808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5825453 |
End bp | 5826253 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640560343 |
Product | hydroxy-methylpyrimidine kinase /hydroxy-phosphomethylpyrimidine kinase |
Protein accession | YP_001241465 |
Protein GI | 148256880 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.429432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.105983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CCGTAGCCCT TACTATCGCA GGGTCCGACT CCTCGGCAGG AGCCGGCATC CAGGCCGATC TGAAGACCTT TGCAGCCTTG TCGGTCTACG GCGCCTCGGT GCTGACCGCG CTGACGGCGC AAAACACCAA GGGGGTGACC GGGGTGCACC TGGTGCCACC GGATTTCGTC AGCGCTCAGA TCGACGCCGT GTTCGACGAT CTCGCCGTCG GCGCGGTCAA AATCGGCATG GTGGCGCAGG CACCGATCGC CGAGGCGATC CATGCCAGCC TGGCACGCTG GCGGCCGGCG CATGTGGTGC TCGATCCGGT GATGGTCGCG ACATCGGGCG CCCGGCTGCT GCCCGAGGAG GCGATCGAGG CGCTCCGCAG CCGGCTGATC CCGCAGGCGT CGCTGATCAC GCCGAATCTG CCGGAGGCGG CTGCGCTGCT CGGCGAACCC ATCGCGACCT CAGAGCAGGC CATCGCGGAG CAGGGCCGCC GGCTGCTCGC GCTCGGCTGT CCGGCCGTCT TGATCAAGGG CGGGCACGGG CAGGGCGCGG AGAGCATTGA TTACCTGATC ACCTCAGGAA CCAGCATCGC GCTGCCAGCG CCGCGCGTCG CGACCAAGAA CACCCATGGC ACCGGCTGCT CGCTGTCGTC AGCGGTGGCC GCGGGGCTGG CAAAGGGCGA GAGCCTGGAG ACGGCGATCC GCCATGCGAA GGATTTCATC TCGGGCGCCA TCGCCGCCGC TGATCGCTTC ACCGTCGGAC ACGGCCATGG GCCGGTGCAT CACCTCTACC GGTTCTATTG A
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Protein sequence | MSTPVALTIA GSDSSAGAGI QADLKTFAAL SVYGASVLTA LTAQNTKGVT GVHLVPPDFV SAQIDAVFDD LAVGAVKIGM VAQAPIAEAI HASLARWRPA HVVLDPVMVA TSGARLLPEE AIEALRSRLI PQASLITPNL PEAAALLGEP IATSEQAIAE QGRRLLALGC PAVLIKGGHG QGAESIDYLI TSGTSIALPA PRVATKNTHG TGCSLSSAVA AGLAKGESLE TAIRHAKDFI SGAIAAADRF TVGHGHGPVH HLYRFY
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