Gene BBta_5600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5600 
SymbolthiD 
ID5155808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5825453 
End bp5826253 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID640560343 
Producthydroxy-methylpyrimidine kinase /hydroxy-phosphomethylpyrimidine kinase 
Protein accessionYP_001241465 
Protein GI148256880 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 
TIGRFAM ID[TIGR00097] phosphomethylpyrimidine kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.429432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.105983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCGTAGCCCT TACTATCGCA GGGTCCGACT CCTCGGCAGG AGCCGGCATC 
CAGGCCGATC TGAAGACCTT TGCAGCCTTG TCGGTCTACG GCGCCTCGGT GCTGACCGCG
CTGACGGCGC AAAACACCAA GGGGGTGACC GGGGTGCACC TGGTGCCACC GGATTTCGTC
AGCGCTCAGA TCGACGCCGT GTTCGACGAT CTCGCCGTCG GCGCGGTCAA AATCGGCATG
GTGGCGCAGG CACCGATCGC CGAGGCGATC CATGCCAGCC TGGCACGCTG GCGGCCGGCG
CATGTGGTGC TCGATCCGGT GATGGTCGCG ACATCGGGCG CCCGGCTGCT GCCCGAGGAG
GCGATCGAGG CGCTCCGCAG CCGGCTGATC CCGCAGGCGT CGCTGATCAC GCCGAATCTG
CCGGAGGCGG CTGCGCTGCT CGGCGAACCC ATCGCGACCT CAGAGCAGGC CATCGCGGAG
CAGGGCCGCC GGCTGCTCGC GCTCGGCTGT CCGGCCGTCT TGATCAAGGG CGGGCACGGG
CAGGGCGCGG AGAGCATTGA TTACCTGATC ACCTCAGGAA CCAGCATCGC GCTGCCAGCG
CCGCGCGTCG CGACCAAGAA CACCCATGGC ACCGGCTGCT CGCTGTCGTC AGCGGTGGCC
GCGGGGCTGG CAAAGGGCGA GAGCCTGGAG ACGGCGATCC GCCATGCGAA GGATTTCATC
TCGGGCGCCA TCGCCGCCGC TGATCGCTTC ACCGTCGGAC ACGGCCATGG GCCGGTGCAT
CACCTCTACC GGTTCTATTG A
 
Protein sequence
MSTPVALTIA GSDSSAGAGI QADLKTFAAL SVYGASVLTA LTAQNTKGVT GVHLVPPDFV 
SAQIDAVFDD LAVGAVKIGM VAQAPIAEAI HASLARWRPA HVVLDPVMVA TSGARLLPEE
AIEALRSRLI PQASLITPNL PEAAALLGEP IATSEQAIAE QGRRLLALGC PAVLIKGGHG
QGAESIDYLI TSGTSIALPA PRVATKNTHG TGCSLSSAVA AGLAKGESLE TAIRHAKDFI
SGAIAAADRF TVGHGHGPVH HLYRFY