Gene BBta_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5500 
Symbol 
ID5152203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5715975 
End bp5716850 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content68% 
IMG OID640560246 
Productputative prolyl aminopeptidase 
Protein accessionYP_001241368 
Protein GI148256783 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0980519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTC TCGTCAATGG CGTCAGGCTA TACTTCGACG TCGAGGGGGC CGCGCTCGTC 
CCCGACGGTC CGGCGATGCG GCAGAAGCCG ACGGTGCTGC TGCTGCATGG CGGCCCCGGA
TTCGACCACA CCAGCTACAA GCCCGCCTAC TCCGCGCTCA CCGACATTGC CCAGCTCGTC
TATCTCGACC ACCGCGGCAA CGGCCGCAGC GAGGACGGGC CGCAGGAGCT CTGGACGCTC
GCCCAATGGG GCGACGACGT CAAAGCGTTC TGCGACATCG TCGGCATCGT CGATCCGATC
GTGCTCGGCG TCTCGTTCGG CGGCTTCGTC GCGATGTCCT ATGCGACCCG GCATCCGGAG
CACCCGGCCA AGCTGATCCT GATCTCGACC GAGGCCAAGG GCCAGTCCTA CCTCGAACAG
CGCGTGGCGC TGTTCGAGAG TTTGGGCGGA CCGGAGGTCG GCGCGCTGGC GCGGCGCCGC
TTCCTCGAAA CGGGCGGACA CAAGGATCAG GCGTCGGTCG AGGCGTGGCA GCGCCTCGCG
CTGCCGCTTT ACACCCGCAA GGGGCACGAT CCCGACATGA TGGCCCGCGC CCTGCGCCGG
CCCGCGGTGC TGCAATGGTT CACCCGGCCG GGCGGCGAGG TGACGTCGTT CGACCTCGTG
CCCGATCTTC ATCGCATCAG CTGCCCGACG CTGGTGATGG GCGGGGAGGA CGATCCGATG
ACGCCGATCG CGTGCCAGGT CGACATCGCC GCCGCGCTGC GTCCCGACCT CGTGCGCTTC
GAACGCTTCG CCGATTGCGG ACATGGCGTC GTGTCCGATC AGCCGGAGCG CGCATTCGCC
GTGATCCGCG ACTTCATCCT TGGCACTCAC GGCTGA
 
Protein sequence
MRVLVNGVRL YFDVEGAALV PDGPAMRQKP TVLLLHGGPG FDHTSYKPAY SALTDIAQLV 
YLDHRGNGRS EDGPQELWTL AQWGDDVKAF CDIVGIVDPI VLGVSFGGFV AMSYATRHPE
HPAKLILIST EAKGQSYLEQ RVALFESLGG PEVGALARRR FLETGGHKDQ ASVEAWQRLA
LPLYTRKGHD PDMMARALRR PAVLQWFTRP GGEVTSFDLV PDLHRISCPT LVMGGEDDPM
TPIACQVDIA AALRPDLVRF ERFADCGHGV VSDQPERAFA VIRDFILGTH G