| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5493 |
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| Symbol | fliR |
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| ID | 5152339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5711132 |
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| End bp | 5711899 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640560239 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001241361 |
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| Protein GI | 148256776 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.209401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATCG ACATCTCGTT TCTTCCGACC CTGGCGGCCG TGTTCATGCT CGCCTTCGCC
CGCATCGGCG CGATGGTGAT GCTCCTGCCG GGGCTGGGCG AGGTCAATAT CCCGGTCCGC
ATCAAGCTGG CGACCGCGCT GCTGCTCACG ATGATCGTGC TGCCGCTGCA TCGCCAAGCC
TATCAGGTCG ACCTGCAGGC CCTGTCACCG CTGCTGGTGA TGATGGTGCA CGAGATCGTG
ATCGGGATCG TGCTCGGCGC GACCGCGCGG GTGACGCTGT CGGCGCTGCA GGTCGCCGGC
TCCGTGATCG CGCAGCAGAT GGGGCTGGGC TTCGTCACCG CGGTCGATCC GACGCAGGGT
CAGCAGGGCG TGCTGATCGG CAACTTCCTC ACCATGCTGG GCGTGACGCT GCTGTTCTCG
ACCGACAGCC ATCACCTGGT GATCGCGGCG CTCAGCGACA GCTACAAGAT CTTCGCGCCG
GGGGAGGTCA TCCCGAGCGG CGACGTCGCC TCGCTGGCGA CCCGGGCGTT CGCCGCCGCC
TTCAAGATCG GGCTGCAACT GTCGGCGCCG TTCCTGGTGT TCGGCCTCGT CTTCAATATC
GGGCTCGGGG TGCTGGCGCG GCTGATGCCG CAGATGCAGG TCTATTTCGT CGGCGCGCCG
CTCTCGATTC TGATCGGATT CCTCATCTTC GGTCTGGTTC TGGCCGCGAT GATGGGCACG
TTTCTCGGCT ATTTCGAAGG CGTCATTCAC GAGATGATGC CGCGGTGA
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| Protein sequence | MRIDISFLPT LAAVFMLAFA RIGAMVMLLP GLGEVNIPVR IKLATALLLT MIVLPLHRQA
YQVDLQALSP LLVMMVHEIV IGIVLGATAR VTLSALQVAG SVIAQQMGLG FVTAVDPTQG
QQGVLIGNFL TMLGVTLLFS TDSHHLVIAA LSDSYKIFAP GEVIPSGDVA SLATRAFAAA
FKIGLQLSAP FLVFGLVFNI GLGVLARLMP QMQVYFVGAP LSILIGFLIF GLVLAAMMGT
FLGYFEGVIH EMMPR
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