| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5483 |
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| Symbol | fumA |
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| ID | 5151589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5699254 |
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| End bp | 5700909 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560230 |
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| Product | fumarase |
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| Protein accession | YP_001241352 |
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| Protein GI | 148256767 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC CCACCGCCTT TCCCGACCAG TCCAAGCCCG TTCCGCCGTA CAAGCACACG
CCGTTGTTTC CGCTGGGGCC GGACACCACG CCCTACAAGA AGATCACGAG CGAGGGCGTG
CGGGTCGAGA AGGTGCTGGG CCGCGACATG CTCGTGGTGT CGCGTGAGGC GCTGCGGGCC
TTGTCCGAGG CCGCCTTCGG CGAGATCAAC CACTTCCTGC GTCCCGGCCA TCTGAAGCAG
CTGCGCAGCA TCCTGGAGGA TCCGGAGGCC AGCCCGAACG ACAAGTTCGT CGCGCTTGAT
TTCCTGAAGA ACGCCAACAT CTCCGCCGGC GGCGTGCTGC CGATGTGCCA GGATACCGGC
ACCGCGATCA TCATGGGCAA GAAGGGCTGC AACGTCATCA CCGATGGTGA CGACGAGGCG
GCGTTGAGCG AAGGCGCCCG CGACGCCTAT CTGCGCCGCA ATCTGCGCTA CTCGCAGGTC
GCGCCATTGT CGATGTATGA GGAGAAGAAC ACCGCCAACA ACATGCCGGC GCAGACCGAG
ATCTACGCCG AGGGCGAGGA CGCCTACAAA TTCATGTTCA TGGCCAAGGG CGGCGGCTCG
GCCAATAAGA GCTTCCTGTT TCAGGCGACA CCCTCGGTGC TCACCAAGGA TCGCCTGCTG
GCCTTCCTCA AGGAGAAGGT CCTGACGCTC GGCACGGCGG CGTGCCCGCC CTATCATTTG
GCGATCGTGA TCGGCGGCAC CTCGGCCGAA TTGTGCATGA AGACGGTGAA GCTGGCGTCG
GCGCGTTATC TCGACGCGCT GCCGACCCAG GGATCGGCCG ATGGCAATGC GTTCCGCGAT
CTGGAGATGG AGCAGGAAAT CCATAAGATG ACGCAGAGCC TGGGCGTAGG CGCCCAGTTC
GGCGGCAAAT ATTTCTGCCA TGACGTCCGC GTCATCCGCA TGCCGCGCCA TGGCGCCAGC
TTGCCGATCG GCCTCGGCGT ATCCTGCTCG GCCGACCGCC AGGTGCTCGG CAAGATCACC
AAGGACGGCG TCTATCTCGA GGAGCTCGAG CATCATCCGG CGCAATATCT GCCGGAGGTC
GAGCAGGCGC TCGGCGGCGA GGTCGTGAAG ATCGACCTCA ACCAGCCGAT GAAGGACATC
CTCGCGACGT TGTCGAAGAA CCCGATCAAG ACCCGGCTGT CGCTGACCGG CACCATGATC
GTGGCGCGCG ACGCCGCGCA TGCCAAGCTG CGCGAGCGGC TCGATCGCGG CGAGCCGCTG
CCGGACTACT TCAAGAACCA TCCGGTCTAC TACGCCGGTC CCGCCAAGAC GCCGGATGGC
TACGCCTCCG GCGCGTTCGG TCCGACCACC GCTGGCCGCA TGGATTCCTT CGTCGATCAG
TTCCAGGCTG CCGGCGGCTC GATGGTGATG GTCGCCAAGG GCAACCGCGC GCCGGCGGTG
CGCGAGGCCT GCAAGAAGCA CGGCGGCTTC TACCTCGGCT CGATCGGCGG CGCCGCGGCG
AACCTCGCCG AGCACTGCAT CAAGAAGGTC GAGGTGGTGG AATATCCCGA GCTCGGCATG
GAAGCGATCT GGCGCATCGA GGTCGTGGAT TTCCCGGCCT TCATCATCAT CGACGACAAG
GGCAACGACT TCTTCAAGGA GCTGAACCTG GGTTGA
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| Protein sequence | MNAPTAFPDQ SKPVPPYKHT PLFPLGPDTT PYKKITSEGV RVEKVLGRDM LVVSREALRA
LSEAAFGEIN HFLRPGHLKQ LRSILEDPEA SPNDKFVALD FLKNANISAG GVLPMCQDTG
TAIIMGKKGC NVITDGDDEA ALSEGARDAY LRRNLRYSQV APLSMYEEKN TANNMPAQTE
IYAEGEDAYK FMFMAKGGGS ANKSFLFQAT PSVLTKDRLL AFLKEKVLTL GTAACPPYHL
AIVIGGTSAE LCMKTVKLAS ARYLDALPTQ GSADGNAFRD LEMEQEIHKM TQSLGVGAQF
GGKYFCHDVR VIRMPRHGAS LPIGLGVSCS ADRQVLGKIT KDGVYLEELE HHPAQYLPEV
EQALGGEVVK IDLNQPMKDI LATLSKNPIK TRLSLTGTMI VARDAAHAKL RERLDRGEPL
PDYFKNHPVY YAGPAKTPDG YASGAFGPTT AGRMDSFVDQ FQAAGGSMVM VAKGNRAPAV
REACKKHGGF YLGSIGGAAA NLAEHCIKKV EVVEYPELGM EAIWRIEVVD FPAFIIIDDK
GNDFFKELNL G
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