| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5477 |
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| Symbol | |
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| ID | 5151341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5694810 |
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| End bp | 5696213 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640560224 |
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| Product | putative carotenoid oxygenase |
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| Protein accession | YP_001241346 |
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| Protein GI | 148256761 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA CGCCTGCCGC GCCCCGGACG GACCGTAGCA ACCTCGCGCC GATCCCGTTC
GAATGCGATG CGCCGTTCCT CGAGATCAGC GGCGAGCTGC CGCGCGAGCT CAACGGCACG
CTGTATCGCA ACGGTCCGAA CCCGCAATTC TCGTCGCCGG GCGCACATTG GTTCGTCGGC
GACGGCATGC TGCACGCGTT CCATCTCGAA AACGGCCGCG CCTCCTATCG CAACCGCTGG
GTCCGGACGC CGAAATTCGA GGCCGAGCGC CGCGCGGGAC GCGCGCTGTT CGGCGGCTTC
GGCCGCAAAC TCCCGGACGC GCCGGCCGAC GTCACGGATG GCGGCGTCGC CAACACCAAC
ATCATCGCCC ATGCCGGTCG CCTGCTTGCA CTGGAGGAGG CGCATCTGCC GACCGAGATC
GAGCCGGGCA CTTTGGCGAC ATCGGGCTAT CACGATTTCG GCGGCCGTCT GCGCGGCGCC
TTCACCGCGC ATCCGAAGAC CGATCCGGTC AGCGGCGAGC TGCTGTTCTT CGGCTACAAC
GCCGCCGGGC CGCTGACGCC GGCATTGACC TACGGCACCG TCGACGCCTC TGGCCGGCTG
ACGCGCCTCG ATCGCTTCGA CGCCCCCTAT GCCAGCATGG TGCATGATTT CGTCGTCACC
GCTGATCACG TGCTGTTTCC GATCATGCCG CTCACCGGAA GCTTGGAGCG CGCAATGTCC
GGCAGGCCGC CTTATGCCTG GGAGCCCGAC AAGGGTGCCT ATGTCGGCAT CATGAAGCGC
GGCGGCGCCG TCAAGGACAT CGTCTGGTAT CGCGGCGAGG CTTGTTACGT CTTTCATGTC
ATGAACGCCT GGGAGGACGG CCACCACATC ATCGCCGACG TCATGCAGTT CGACGAGCCG
CCGCTGTTTC CGCACCCCGA CGGCCGGCCG ACCGATCCGG CCAAGTCGCG CGCGCGGCTC
TGCCGCTGGA GCTTCGACCT CGCCGGCACC AGCGAACGCT TCACACAGAC CTATCTCGAC
GATCTCACCG GCGAATTCCC CCGCATCGAC GACCGCCGCG CCGGACTTCC GAGCCGCCAC
GGCTGGTACG CCTGCGCCAA TCCGGACGGC CCGCTGTTCG GCGCCCTCTC CGGCCTTGCG
CAGGTCGACG GCGCCGCGGG CACGCGGCGT GCGACCTACC TGCTGCCGGA TGGCGACAGC
CTGTCGGAGC CGGTGTTCGT GCCGCGCCGC GCCGATGCGG CGGAAGGTGA CGGCTGGCTG
CTCACGGTGG TGTGGCGCGC TGCGACCAAC ACCTCCGACC TCGCGGTCTT GAACGCCACC
GACATCGCCA GCGGACCGGT GGCGCTGGTC CATCTCGGCC ATCGCGTCCC CGACGGCTTT
CACGGCAATT GGGTCGGCGC CTGA
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| Protein sequence | MTQTPAAPRT DRSNLAPIPF ECDAPFLEIS GELPRELNGT LYRNGPNPQF SSPGAHWFVG
DGMLHAFHLE NGRASYRNRW VRTPKFEAER RAGRALFGGF GRKLPDAPAD VTDGGVANTN
IIAHAGRLLA LEEAHLPTEI EPGTLATSGY HDFGGRLRGA FTAHPKTDPV SGELLFFGYN
AAGPLTPALT YGTVDASGRL TRLDRFDAPY ASMVHDFVVT ADHVLFPIMP LTGSLERAMS
GRPPYAWEPD KGAYVGIMKR GGAVKDIVWY RGEACYVFHV MNAWEDGHHI IADVMQFDEP
PLFPHPDGRP TDPAKSRARL CRWSFDLAGT SERFTQTYLD DLTGEFPRID DRRAGLPSRH
GWYACANPDG PLFGALSGLA QVDGAAGTRR ATYLLPDGDS LSEPVFVPRR ADAAEGDGWL
LTVVWRAATN TSDLAVLNAT DIASGPVALV HLGHRVPDGF HGNWVGA
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