Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5448 |
Symbol | alaS |
ID | 5149874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5667077 |
End bp | 5669767 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640560195 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001241319 |
Protein GI | 148256734 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.10309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG TCAACGAGAT CAGGTCGACC TTCCTCAACT TCTTCGCCGC GAACGGCCAC GAGATCGTGC CGTCCTCGCC GCTCGTGCCG CGCAACGACC CGACCTTGAT GTTCACGAAC GCCGGCATGG TGCAGTTCAA GAACGTCTTC ACCGGCGTCG AGAAGCGGCC GTACCACCGC GCCACCACGT CGCAGAAATG CGTTCGTGCC GGCGGCAAGC ACAACGATCT CGACAATGTC GGCTACACCG CCCGGCATCA CACCTTCTTC GAGATGCTCG GCAACTTCTC CTTCGGCGAC TACTTCAAGG AGAACGCCAT CGAGCTCGCC TGGAAGCTCG TTACCAAGGA GTTCGGTCTC CCCAAGGACA AGCTGACCGC GACCGTCTAT ATCGACGACG ACGAGGCGTT CGGCCTCTGG AAGAAGATCG CGGGCCTCCC TGAGTCGCGT ATCATCCGCA TCGCGGGCTC GGACAATTTC TGGCAGATGG GCGACACCGG CCCGTGCGGC CCGTGCTCGG AGATCTTCTA CGACCATGGC GACAAGGTCT GGGGTGGCCC GCCTGGCTCG CCGGAGGCCG ATGGCGACCG CTTCATCGAG ATCTGGAACC TCGTGTTCAT GCAATACGAG CAGCTCGAGG GCGGGGTCCG CAATCCCCTG CCGAAGCCGT CGATCGACAC CGGTGCGGGC CTCGAGCGCG TCGCCGCGGT GCTGCAGGGC AAGCACGACA ATTACGACAT CGACCTGTTC GTCGCCCTGA TCCGCGCCAT CGCCGACCTC ACCAATGCCG ATCCGCAGGG CCCGCAGAAG GCGAGCCTGC GCGTCATCGC CGACCACCTG CGCGCCTCGT CGTTCCTGAT CTCGGACGGC GTGCTGCCCT CCAATGAAGG CCGCGGCTAT GTGCTGCGCC GGATCATGCG CCGCGCGATG CGCCACGCCC AGCTGCTCGG CGCCCGCGAG CCGTTGATGC ACAAGCTGGT CGGCGCGCTG ACCCGCGAGA TGGGCCAGGC CTATCCGGAG CTGATCCGCG CCGAGGCGCT GATCAAGGAG ACGCTGCGGC TCGAAGAGAC CCGCTTCCGC AAGACCTTGG AGCGCGGCCT TGCGATCCTC GACGAGAAGT CGTCCACCCT GAAGAAGGGC GACATGTTCG ACGGCGACGT CGCCTTCACC CTTTACGACA CCTATGGCTT CCCGCTCGAC CTCACCCAGG ACGCGCTGAA ATCGCGCGGC ATCAGTGTCG ACCAGGCCTC CTTTACCGAC GCGATGGAGC GTCAGCGCGC CAAGGCGCGC GCGGCCTGGG CCGGAAGCGG CGAGGCGGCG ACCGAGAATG TCTGGTTCCC GCTGCGCGAG AAGCTCGGTG CGACCGAGTT CCTCGGCTAC GAGACCGAGA CGGCGGAGGG CGCCGTCACC GCGCTGGTCA AGGACGGTGC CGAGGTCGAG GGCCTCAAGG CCGGCGAGAG CGGCGCGATC GTGCTGAACC AGACGCCGTT CTATGGCGAG TCCGGCGGCC AGGTCGGCGA CACCGGCGTG ATGAGCGGCG ACGGCGTTCG CGTTCGCATC ACCGACACCC AGAAGAAGGC CGGCGACCTG TTCGTGCATA TCGGCACCGT GGAGCAGGGC ACGCTCAAGC TCGGCGCCGC GCTGCAGCTC GAGGTCGATC ACGGCCGCCG CTCCGCGATC CGCGCCAACC ATTCGGCGAC CCACATCCTG CACGAGGCGC TGCGCCAGGT GCTTGGTGAC CACATCGCGC AGCGCGGCTC GCTGGTCTCG CCCGACCGGC TGCGCTTCGA CTTCGCCCAT CCCAAGCCGA TCTCGGCGGA GGAACTCGCC CGCGTCGAGG ACATCGCCAA CGACGTCGTG CTGGAGAATG CCGAGGTCAC GACCCGGTTG ATGGCGCTCG ACGATGCCCG CGAGGCCGGC GCAAGGGCGC TGTTCGGCGA GAAATATGGC GACGAGGTTC GCGTCGTCTC GATGGGCAAC GCCGCGCGCG ACCAGGCCTC CAATGCGCAA GCCTCCAATG CAATGGGCTG GTCGGTCGAG CTGTGCGGCG GCACTCATGT CAAGCGCACC GGCGATATCG GCCTGATCGC GGTCACCTCG GAGAGCGCGG TGTCATCCGG CGTTCGCCGC ATCGAGGCGC TGACGGCGCG CGGCGCCCGT GCCCATGCCA ACCACAATCT CTCGCTCGCC AAGGCCGCCG CGGCCGAGCT GCGCACCACC GTCGACGAGG TGCCGGCGCG CATCGCGGCG CTGATGGAGG AGCGCAAGAA GCTCGAGCGC GAGCTGTCGG ATGCGCGCAA GAAGCTTGCG ATGGGCGGCG GCGCCGCGGC CGGCGGGTCC GCTTCCGGCA TCCGTGAGGT CGCCGGCGTC AAGCTGATGG CCCGCGCCGT CGAGGGCGTC GAGATGAAGG ATCTCAAGTC GCTGGTCGAC GAGGCCAAGA AGCAGCTCGG CTCCGGCGTC GTGGCCATCG TCGGCCGCGC CGAGGACGGC AAGGCCGGCG TGGTCGTCGG TGTCACCGCC GATCTCACCG CGCGCTTCAA CGCGGTCGAG CTGGTGCGCG CGGCATCGGA GGCGCTGGGC GGCAAGGGCG GCGGTGGCCG TCCCGACATG GCCCAGGCCG GCGGTCCCGA TGGTTCCAAG GCGGAGGCCG CGCTCGCCGC GATCGAGAGC GCGATCAGCA GGGCGGGCTG A
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Protein sequence | MSGVNEIRST FLNFFAANGH EIVPSSPLVP RNDPTLMFTN AGMVQFKNVF TGVEKRPYHR ATTSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKENAIELA WKLVTKEFGL PKDKLTATVY IDDDEAFGLW KKIAGLPESR IIRIAGSDNF WQMGDTGPCG PCSEIFYDHG DKVWGGPPGS PEADGDRFIE IWNLVFMQYE QLEGGVRNPL PKPSIDTGAG LERVAAVLQG KHDNYDIDLF VALIRAIADL TNADPQGPQK ASLRVIADHL RASSFLISDG VLPSNEGRGY VLRRIMRRAM RHAQLLGARE PLMHKLVGAL TREMGQAYPE LIRAEALIKE TLRLEETRFR KTLERGLAIL DEKSSTLKKG DMFDGDVAFT LYDTYGFPLD LTQDALKSRG ISVDQASFTD AMERQRAKAR AAWAGSGEAA TENVWFPLRE KLGATEFLGY ETETAEGAVT ALVKDGAEVE GLKAGESGAI VLNQTPFYGE SGGQVGDTGV MSGDGVRVRI TDTQKKAGDL FVHIGTVEQG TLKLGAALQL EVDHGRRSAI RANHSATHIL HEALRQVLGD HIAQRGSLVS PDRLRFDFAH PKPISAEELA RVEDIANDVV LENAEVTTRL MALDDAREAG ARALFGEKYG DEVRVVSMGN AARDQASNAQ ASNAMGWSVE LCGGTHVKRT GDIGLIAVTS ESAVSSGVRR IEALTARGAR AHANHNLSLA KAAAAELRTT VDEVPARIAA LMEERKKLER ELSDARKKLA MGGGAAAGGS ASGIREVAGV KLMARAVEGV EMKDLKSLVD EAKKQLGSGV VAIVGRAEDG KAGVVVGVTA DLTARFNAVE LVRAASEALG GKGGGGRPDM AQAGGPDGSK AEAALAAIES AISRAG
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