Gene BBta_5447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5447 
Symbol 
ID5149873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5665845 
End bp5667074 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content69% 
IMG OID640560194 
Productvoltage-dependent potassium channel 
Protein accessionYP_001241318 
Protein GI148256733 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.532768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0697598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCCGC TCGGGCCGGG GCAGAGCATT CGCGATCCCG ACCTGCGGGA CCGGCTCTAC 
GAGCTGCTCG AGCACGACCA TCTGCCGCTG TCGGTCGGTT CGCGCCTGGT GCGGGCGGTC
GTCATCGTGA TCTTTGCCGA CGTCCTGGCG ACGGTCCTGG CCTCGGTGCC GCATCTCGAC
GCCCGCTTCG GCGCGACCTT CACCACGGTG AAGGTCATGG CCGTGCTGGT GTTCGGCTTC
GAATATGTCG CCCGTCTCTG GAGCGTCGCC GGCCATACGC CGCTGCATGT GTCGCCGTTG
CGCGACCGTC TGCAATACGC CTTCTCCGCG CTCGGCCTCA TTGATCTCTG CGCCTTCCTG
CCGGCTGCCC TCGTGCTCGC CTTCGGCGAT CACGCCACGC TTGCAGTGCT GGTCGTGCTG
CCCTTCCTCA AGCTGGTGCG CTATTCGCCG GCGATGCGCT CGCTGCTGGC CGCGATCCAG
GCCGAGCGCC GCACCTTGGT CGGCTGCATC GCGATCCTGG CCGGCGCCGT GCTGCTGTTC
GCCTCGCTGC TCTACGCGAT CGAGCGCAAC GTGCAGCCCG ACAAGTTCGG CACCATCCCC
GACGCGATGT GGTGGGCGAT CGTGACGCTC GGCACCGTCG GCTATGGCGA CGTGGTGCCG
GTGACGCCGC TCGGCAAGGC GATCTCGGTG TTCACCATCG TCGGCGGCCT CGCCATGATC
GCGCTGCCGG TCGCGATCAT CTCCAGCGCC TTTGCTGATG AGGTGAAGCG GCGCGACTTC
GTCGTCACCT GGGGCATGCT GGCGCGGGTG CCGCTGTTCT CGCATCTCGC CGCCGCCGAG
ATCGCCGACA TCATGCGGCT GTTGCGCGCG CGCACCATCG AGGCCGGCGA GATCCTCGTC
CGCCGCGGCG ATGTCGCCTC GTCGATGTAT TTCATCACCG CGGGCGAGGT CGAGATCGAG
CTGCCGACGC AATGTGTGCG GCTCGCCGAC GGGACGTTCT TCGGCGAGAT CGCGCTGCTG
CATCGGACCA AGCGCTCCGG CACCGTCAAG GCGACGCGCA AGACGCGGCT GCTGGTGCTC
GATGCGCAGG ATTTCCACGC GCTGATCGCG CGCATGCCGG CGCTCGCCGC CCACGTCACC
ACCACGGCGA AAGCGCGCAT GGCCGATTCC GGCGACCTCG CCATCGCCGA ACTGTCGCAG
GTCGAGCACG ACGACCAGCC GGGCGGGTAG
 
Protein sequence
MPPLGPGQSI RDPDLRDRLY ELLEHDHLPL SVGSRLVRAV VIVIFADVLA TVLASVPHLD 
ARFGATFTTV KVMAVLVFGF EYVARLWSVA GHTPLHVSPL RDRLQYAFSA LGLIDLCAFL
PAALVLAFGD HATLAVLVVL PFLKLVRYSP AMRSLLAAIQ AERRTLVGCI AILAGAVLLF
ASLLYAIERN VQPDKFGTIP DAMWWAIVTL GTVGYGDVVP VTPLGKAISV FTIVGGLAMI
ALPVAIISSA FADEVKRRDF VVTWGMLARV PLFSHLAAAE IADIMRLLRA RTIEAGEILV
RRGDVASSMY FITAGEVEIE LPTQCVRLAD GTFFGEIALL HRTKRSGTVK ATRKTRLLVL
DAQDFHALIA RMPALAAHVT TTAKARMADS GDLAIAELSQ VEHDDQPGG