| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5436 |
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| Symbol | |
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| ID | 5150518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5656636 |
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| End bp | 5657976 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640560188 |
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| Product | carbohydrate-selective porin, OprB family |
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| Protein accession | YP_001241312 |
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| Protein GI | 148256727 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.390026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.345232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGGT TTGTGACGAC CGCACGCATG TGCGGCGTGG GTGTTGCTTT GTCTCTGGTG
GGGTGTGGGG CGTATGCGGC GGATATGCCG ACCAAGGCGC CGATTCCCTA TGCCGGTGTC
GATGATTTCT GGACGCGGCC ATATCTGTTC GGCGATCTCG GCCGGACCAA ATTGAAGGAG
CAGGGCATCT CGCTCGCGCT CACGCTCGGC GACGAAGCCG TCACCAATCT CTCCGGCGGC
TCGCGCAACA CTTCGGCCAA TGCCGGGCAG TTGTGGTTCC AGGCCAAGTT CGACATGGCC
AAGCTCGCCG GAATCCCCGG CGGCACGATC GGCATCACGC TGGTCGATCG CTTCGGCAAG
AACCTCAACA GCGAGGCCGG CATCCCGGCG CTGCAACTGA CCAACGAGGT GTTCGGCCGC
GGCAACATCC TGCGCCTGAC CGAGTTCTAC TACTCGCAGA AGCTGCTCGG CGACCGCCTC
GAACTGAAGG GCGGCCGGCT GCCGGTCGGC TCCGACTTCT TCTTCGGCCA GTGCGAGTTC
ATCAACCTGA CCTTCTGCGG CGGCCAGCCC GGCAACATCC AGGGCGGCTA CATCTACAAC
TGGCCGGTCA GCCAATGGGC CGGCGTCGTG CACTACAATT TCACCAAGGA GTGGAAGCTG
TCGGTCGGCG TCTACGACGC CAATCCGAAC TATCTCACGA CGTCGGATGC GGGCGTCTAT
TTGGCGCCGG GCATTCCGCG CTCGAACCCG GCCGCGGGCG TGCTGGTGCC GGTCGAAGTG
GTGTGGGAAC CGAGCGGTCC GCTGAACGGC ACCTGGCGCT TCGGCGGCTG GTATGACAGC
GCCTCGTCGA TCGACGGTGG CCTGCCCGGC ATCATCGGCG TTGTCCGCGG CGGCCCCGGC
GTCGGCGACC AGAACCTCAG CAGCCAGCGC GGCCGCTACG GCTTCTACGA ATCGATCCTG
CAGCGCCTGA CGGTCGACGG TCCCAAGGCT CAGGGCTGGT ACACCTTCCT CAACACCAGC
GTCGCCGATC ACCGCACCTC GTATCAGGAC TACCAGATCG CCTGGGGCAT CAAGCACACC
GGCACCTTCT CGTTCCGTCC CGAGGACGAG GTCGGCTTCG CGGTGGGCAC GACACACGTC
AATTCCGCGG CGCTGACGCC GAATGCCGGC GGCAACGAGA TCCCGCTCGA AGCCTGGTAC
GGCTGGCAGG CGACCGGTTG GATGAACATC AAGTTCGACG CGCAATATGT CATCAATCCC
GGCGGCCGCG GCTTCAACGG CGCCGGCGTG AAAACCAACA ATGCCGTGGT GCTCGGCCTG
CGCACCGTGG TCCACTTCTG A
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| Protein sequence | MNGFVTTARM CGVGVALSLV GCGAYAADMP TKAPIPYAGV DDFWTRPYLF GDLGRTKLKE
QGISLALTLG DEAVTNLSGG SRNTSANAGQ LWFQAKFDMA KLAGIPGGTI GITLVDRFGK
NLNSEAGIPA LQLTNEVFGR GNILRLTEFY YSQKLLGDRL ELKGGRLPVG SDFFFGQCEF
INLTFCGGQP GNIQGGYIYN WPVSQWAGVV HYNFTKEWKL SVGVYDANPN YLTTSDAGVY
LAPGIPRSNP AAGVLVPVEV VWEPSGPLNG TWRFGGWYDS ASSIDGGLPG IIGVVRGGPG
VGDQNLSSQR GRYGFYESIL QRLTVDGPKA QGWYTFLNTS VADHRTSYQD YQIAWGIKHT
GTFSFRPEDE VGFAVGTTHV NSAALTPNAG GNEIPLEAWY GWQATGWMNI KFDAQYVINP
GGRGFNGAGV KTNNAVVLGL RTVVHF
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