| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5426 |
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| Symbol | |
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| ID | 5150538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5646181 |
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| End bp | 5647380 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640560179 |
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| Product | putative tRNA/rRNA methyltransferase |
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| Protein accession | YP_001241303 |
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| Protein GI | 148256718 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[S] Function unknown |
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| COG ID | [COG0565] rRNA methylase
[COG2852] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.138819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGGCA CCGACAAGAC CAAGGCAGGA ATGGAGATCG CAGGCCCGGT GGTGATCCTG
GTCGAGCCGC AGCTCGGCGA GAACATCGGC ATGGCCGCCC GCGCGATGGG CAATTTCGCG
CTCACCGAGC TGCGCCTGGT CAATCCGCGC GACGGCTGGC CGAACATCGC CGCCCAACGG
GCGGCGGCGG GTGCCGACCA CATCATCGAC CACGTCCGGC TGTTCGCGAC CCTGCCGGAG
GCGATCGCCG ATCTCGACCT CGTCTTCGCG ACCACCGCCC GCTCTCACGA CCAGGCCAAG
CCGGTGATGG GGCCGGAGGC CGCCGCCCGC GAGATGCAGG GCCAGATCGC CGCCGGCGGC
CGGGCCGGCA TCCTGTTCGG CCGTGAGCGG TCGGGCCTGA CCAATGAGGA GGTCGCCCGC
GCCAACCGCA TCATCACCTA TCCGGTCAAT CCAGGCTTCG CCTCGCTCAA CCTCGCCCAG
GCCGTGCTGC TGATGGGCTA TGAATGGTTC AAGCTGGTGA CCTTCGGCGC GCTGCCCTTC
ACGATGCCCG AACGCTCCGA GCGCGCCACC CAGGAGCAGC TGGAGGCGTT CTTCGAGAAC
CTCGTCCGCG AGCTCGACCG GGTCGAATTC CTGCGGCCCG CCGAGAAGCG CGAGACCATG
CTGGTCAATT TGCGCAACAT CTTCTTCCGC ATGGAACCGA CGAAGCAGGA CATCCACACT
TTGCACGGCG TGGTCATGGC GATCGCCGAA GGGCGCAAAG GACCGGCCAA GGGCGGCGTG
CTCGACAGCA CCCAGGCGAG CCGGCTGCGG GCGCTGATCG CCGAGCAGGG CACGGTGGCC
AATTTGCCGG ATTCGCGCGG CTCGCTGCGC GGGCTGGCGC GGCTGCTCCG CCGCAACCCG
ACCGACGCCG AGCGCGCGTT GTGGCACGCG CTGTCGCGCG ACCGCCGCTT CGCCGGCCAG
TTCAAGCGCC AGACCCCGGT CGGCCGCCAC ATCCCCGACT TCGTGTCCTT CATCCACCGC
CTCGCCATCG AGCTGGTGGG CGACGACGAG AGCGAGGGCG TGGTTGCGGA TCGCGCCCAG
CGCCGGGCGT GGCTGGAAAG CCGCGACTAC CGCGTGACCG AGGTGAAGGG CGCGGACGTC
GAGGGCGATC TCGAGGCGGA GCTGAAGCGG CTGCAGGCGC TGATCGCGGA GCGAAGATAG
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| Protein sequence | MSGTDKTKAG MEIAGPVVIL VEPQLGENIG MAARAMGNFA LTELRLVNPR DGWPNIAAQR
AAAGADHIID HVRLFATLPE AIADLDLVFA TTARSHDQAK PVMGPEAAAR EMQGQIAAGG
RAGILFGRER SGLTNEEVAR ANRIITYPVN PGFASLNLAQ AVLLMGYEWF KLVTFGALPF
TMPERSERAT QEQLEAFFEN LVRELDRVEF LRPAEKRETM LVNLRNIFFR MEPTKQDIHT
LHGVVMAIAE GRKGPAKGGV LDSTQASRLR ALIAEQGTVA NLPDSRGSLR GLARLLRRNP
TDAERALWHA LSRDRRFAGQ FKRQTPVGRH IPDFVSFIHR LAIELVGDDE SEGVVADRAQ
RRAWLESRDY RVTEVKGADV EGDLEAELKR LQALIAERR
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