| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5423 |
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| Symbol | |
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| ID | 5150536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5641790 |
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| End bp | 5643907 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560177 |
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| Product | toxin secretion ABC transporter (ATP-binding and membrane protein) |
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| Protein accession | YP_001241301 |
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| Protein GI | 148256716 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.192107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGT GTACGGATCA GGGCGCATGG GCGCTGGCGC TGTCGCTGCA TCTGCTCGGC
ATCGTCGCCG ATCCCGGCCG CATCCAGCAC GAGGCTGGCC GCAGCGACGC ACTCTCGGTT
GATGATCTCC TGCGCGCCAC CGCGCGCTTT CCGGTCAAGG CGAGGCTGGT CACATCGAAG
ATCGCACGCC TGAAGACGAC GCCGCTGCCG GCGCTCGCCG TGCTCAAGGA TGGCGGCTTT
GCCGTGATCG GCAAGGTGAC CGAGACCGCT GTCCTGATCC AGGGGCTTAG CGATGCGGGG
CCGCGTCTGC TGGCCTTTGC CGAGTTCGAA ACGCTGTGGT CCGGCCAGCT CATCCTGATC
GCCAAGCGCG CGGAGCTGTC GGACACCGCG CGCCGGTTCA ATCTTGGCTG GTTCGTTTCA
GCCATCGGCA AGTACCGGCG TATCCTGATC GAGGTGCTGC TGGCGTCGTT CGTGATCCAG
CTGTTCGGCC TGGCGACGCC GATGATCTTC CAGGTCGTCA TCGACAAGGT GCTGGTGCAT
CGCGGATTGT CGACGCTTGA GGTGATGGTT GCGGGCCTCG CGCTGATCGC GCTGTTCGAG
GCGGTGCTGT CGGGCCTGCG CACCTATCTG TTCACCCACA CGTCCAACCG CATCGATGTC
GAGCTCGGTG CGCGGCTGTT CCGGCATCTG ATGCGGCTGC CGCTGGCCTA TTTCGAGAGC
CGTCGCGTCG GCGACAGCGT CGCGCGGGTG CGTGAGCTGG AGACCATCCG CCAGTTCATC
ACCTCGTCCT CGATCACTTT GGTGCTCGAT CTCGCCTTCG CCGCCGTCTT CATCGGCGTG
ATGTTCCTCT ATAGCTCCAC CCTGGCCTGG ATCGTCTGCG CGACCCTGCC GGTCTATGCA
CTGCTGTCGC TCGCCACTAC GCCCGCGTTC CGGACACGGC TGGACGAAAA ATTCCGTCGC
GGCGCCGAGA ACCAGGCGTT CCTGGTCGAG AGCGTCACCG GCGTCGAGAC CATCAAGGCG
ATGGCCGTCG AGCCGCTGAT GCAGCGGCGC TGGGAGGAGC AGCTCGCGAG CTATGTCGGC
GCCTCCTTTT CGGCGTCGCA GATCGGCAAT TGGGCGAGCC AGGCCGCCAG CCTGCTCAAC
AAAAGCGTCG GCGCTCTGAC GCTGTTCGTC GGCGCCGGCC TCGTGATCGC CAATCGGATG
ACGGTCGGCG AACTCGTCGC CTTCAACATG CTCGCCAACC AGGTCTCAGG CCCGGTGCTG
CGGCTGGTGC AGGTCTGGCA GGATTTCCAC CAGGTGCGGC TGTCGGTCGA GCGGCTCGGC
GACATTCTCA ACACGCCGGT CGAGGCGCAG AGCGGCGGCG CCGAGCAGAA CCTACCGCCG
CTGCAGGGCG CGATCGAGTT CGAGCGCGTG ACTTTCCGCT ACGGGCTCAA CACTCAGCCG
GTGCTGCGCG ATGTTTCCTT GAAGATCGGG GCAGGGCAGG TGGTCGGCAT CGTCGGTCCC
TCGGGCTCCG GCAAGAGCAC GATCGCCAAG CTGGCGCAGC GGCTGTACCT GCCGGAAGCG
GGCCGGGTGC TGGTCGACGG CGTCGACACC GCGGTGCTCG ATCCGTCCTG GCTGCGCCGC
CAGATCGGCG TGGTGCTGCA GGAGAACGTG CTGTTCAACC GCTCGGTGCG CGAGAACATC
GCGCTCGCTG ATCCAGCGTT GCCGATGGAG AAGGTCGTCG AGGCGGCCAA GCTCGCCGGC
GCGCATGAGT TCATCTGCCG GATGCCGCAG GGCTATGACA CGGTCATCGG CGAGCGCGGC
GTGTCGCTGT CCGGCGGCCA GCGCCAGCGC ATCGCGATCG CGCGCGCGCT GGTCGGCGAT
CCCCGCATCC TGATCTTCGA CGAGGCGACC TCGGCGCTCG ACTACGAGTC CGAGAGCATC
ATCCAGGCCA ATATGCGCGA CATCGTGCGC GGCCGCACCG TGCTGATCAT CGCGCACCGG
CTGTCGACGG TGCGCAGCGC CGACCGCATC CTGACGATCG AGAACGGCGT GATCATCGAG
GACGGCACCC ACGATCAGCT GGTGGCCGGC GGCGGGCGCT ATGCGACCTT GCACAGAATT
CAGTCCGCGG GCCGCTGA
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| Protein sequence | MQACTDQGAW ALALSLHLLG IVADPGRIQH EAGRSDALSV DDLLRATARF PVKARLVTSK
IARLKTTPLP ALAVLKDGGF AVIGKVTETA VLIQGLSDAG PRLLAFAEFE TLWSGQLILI
AKRAELSDTA RRFNLGWFVS AIGKYRRILI EVLLASFVIQ LFGLATPMIF QVVIDKVLVH
RGLSTLEVMV AGLALIALFE AVLSGLRTYL FTHTSNRIDV ELGARLFRHL MRLPLAYFES
RRVGDSVARV RELETIRQFI TSSSITLVLD LAFAAVFIGV MFLYSSTLAW IVCATLPVYA
LLSLATTPAF RTRLDEKFRR GAENQAFLVE SVTGVETIKA MAVEPLMQRR WEEQLASYVG
ASFSASQIGN WASQAASLLN KSVGALTLFV GAGLVIANRM TVGELVAFNM LANQVSGPVL
RLVQVWQDFH QVRLSVERLG DILNTPVEAQ SGGAEQNLPP LQGAIEFERV TFRYGLNTQP
VLRDVSLKIG AGQVVGIVGP SGSGKSTIAK LAQRLYLPEA GRVLVDGVDT AVLDPSWLRR
QIGVVLQENV LFNRSVRENI ALADPALPME KVVEAAKLAG AHEFICRMPQ GYDTVIGERG
VSLSGGQRQR IAIARALVGD PRILIFDEAT SALDYESESI IQANMRDIVR GRTVLIIAHR
LSTVRSADRI LTIENGVIIE DGTHDQLVAG GGRYATLHRI QSAGR
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