Gene BBta_5382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5382 
Symbol 
ID5150112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5606338 
End bp5607009 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID640560139 
Producthypothetical protein 
Protein accessionYP_001241263 
Protein GI148256678 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.564815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.588654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC TTGCCCGTGT CGTCGTCCCC GGTCTGCCGC ATCATGTCAC CCAGCGCGGC 
AATGGTCGCG CACGCACCTT TTTCGGTGAC GACGATTACG CGCTCTATCG TGACCTGCTT
GCGACCCATT GCCAGGCGGC CGACGTTGCG GTGTGGGCGT GGTGCCTGAT GCCGAACCAT
GTGCATCTGA TCCTGGTGCC GTCGGATGCC GATGGCCTGC GTCGGGCGCT GGCGCGGGTG
CATCGTGTCT ATGCCGGAAT CATCCAGGCG CGCCGCAAGC GCAGAGGGCA TTTCTGGCAG
GGGCGGTTCG GCGCGGTGGC GATGGACGAG GCGCATCTGG CGGCGGCGCT GCGCTATGTC
AGCCTCAACC CGGTGCGGGC GCGGCTGGTG ACACGCGCCC AGGACTGGGC GTGGTCGAGC
ACGCGCGCGC ATCTGCGCGG GCGCGACGAC GGCGTCACCG CGCGTGAGCC TGTCAAGACG
ATGTTTCCGG ACATGGTCGG CCTCCTGAGC CGCGCGCCCG AGGATGAGGA GGAGCTGTTC
GCCCGCCTGC GCGCCGCCGA GAGCATCGGC CGTCCGATCG GCAGCGACCG TTTCCTCACC
CGAATCGAGA AAATGACCGG GCGCGTGCTC AAGCCGGCCA AACGCGGGCC GAAGCCGGCA
GCGGAGGATT GA
 
Protein sequence
MARLARVVVP GLPHHVTQRG NGRARTFFGD DDYALYRDLL ATHCQAADVA VWAWCLMPNH 
VHLILVPSDA DGLRRALARV HRVYAGIIQA RRKRRGHFWQ GRFGAVAMDE AHLAAALRYV
SLNPVRARLV TRAQDWAWSS TRAHLRGRDD GVTAREPVKT MFPDMVGLLS RAPEDEEELF
ARLRAAESIG RPIGSDRFLT RIEKMTGRVL KPAKRGPKPA AED