Gene BBta_5366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5366 
Symbol 
ID5150219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5592589 
End bp5593482 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content71% 
IMG OID640560124 
Productputative inner membrane transport protein of unknown function 
Protein accessionYP_001241248 
Protein GI148256663 
COG category[G] Carbohydrate transport and metabolism
[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00165583 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAGACCC GCTCCGATCT CACCCGCGAG CTCGCCCTCC TGCTCGTGCT GTCCACCTTG 
TGGGGCGCCT CCTACACCTT CATCAAGATC GGCGTCGAGA CCATCCCGCC GCTGACCCTG
ATCGCTGCAC GGACCTTGAT CGCAGGACTG CTGCTCGCCG CGATCATCCG CAGCCGCGGC
CTCGGCTGGC CGCGCGAGCG CGCGACCTGG CGCCGCTTTC TGATTCAGGC CGGCCTCAAC
AGCGTCGTGC CCTTCACGCT GATCGCCTGG GCCGAGCGCA CCGTCGAGGC CGGGCTCGCC
ACGATCCTGA ACGCGACCTC GCCGATCTTC GCCTTCCTGC TGACGACGCT GGTCACGCGC
CACGAGCCGG TCACGCGGCG CAAGCTCGGC GGCATCGCCA CCGGCCTTGC CGGCACCTGC
CTCATCGTGG GGACCGAGGC GCTGGGCGGG CTTGGCCGCG AGCTGTGGGC CCAGCTTGCG
ATCGTCGCCG CCACCATCTG CTATGCGGGA GCGGCAATCA TGGGCAAGCG CTTCAAGGGG
CTCGACCCGA TGCTGCCCGC GGCCGGCTCG CTGCTGTCGG GCGCCGTGAT CCTGATGCCG
CTCGCGCTCA TCGTCGACCA TCCCTGGACG CTGCAGCCGT CGCTGCGCTC GGTGCTGGCG
CTGGTCGCGC TGGCGACCGT CTCGACCGCC GCCGCGATGG TGATCTATTT CCGCCTGGTG
CAGACCCTCG GCTCGATCGG CGCGACCGCG CAATCCTATC TGCGCGTGCC GATCGGCGTC
GCCATCGCCG TGGCCGGGCT CGGCGAGCAG CTGGCACCAA CGGCCTGGAT CGGCCTCGCC
TGCGTCGTCG TCGGCGTCGT CGCAATGACG CTGCCGGCGC GCAAGGCGGC ATAG
 
Protein sequence
MQTRSDLTRE LALLLVLSTL WGASYTFIKI GVETIPPLTL IAARTLIAGL LLAAIIRSRG 
LGWPRERATW RRFLIQAGLN SVVPFTLIAW AERTVEAGLA TILNATSPIF AFLLTTLVTR
HEPVTRRKLG GIATGLAGTC LIVGTEALGG LGRELWAQLA IVAATICYAG AAIMGKRFKG
LDPMLPAAGS LLSGAVILMP LALIVDHPWT LQPSLRSVLA LVALATVSTA AAMVIYFRLV
QTLGSIGATA QSYLRVPIGV AIAVAGLGEQ LAPTAWIGLA CVVVGVVAMT LPARKAA