Gene BBta_5356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5356 
Symbol 
ID5150226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5582517 
End bp5583059 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID640560115 
Productputative cytochrome b561 
Protein accessionYP_001241239 
Protein GI148256654 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00398289 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACTGAAA CGAATAAAGC CTATGATCCC CTGCTACGAT GGATCCATTG GGTCACAGCC 
GTGCTGTTCA TCGCAGCCAT GCTGATCGGG CTGTATTGCG GCCTGCAGCC CGCGGGAACG
TCGCCGCGCC GCGAATTGCT GGAGATCCAC AAATCGCTCG GCATCACGCT GTTTCTGCTG
ACGCTGCTTC GCGTGGTCGT GAGGTCGAGA ACCACGGCAC CGCCAGCGCC TGCCACATTC
GGTCCGCTCG TCCGGGCGCT CTCACAGCTC AATCATTGGG CGCTCTATGC GCTGCTGCTG
ATCATGCCGG TGACCGGCTA CATGTTCTCG TCGGCCGGCG GCTACTCGCT GCGCTATTTC
TGGACCTTCA GCTGGCCGCG TCTATTCGCC GGCGACAAGG CGATCGCCCA TGCCGGCGAG
ATCGCGCATG ATACGTTGGC CTATCTGGTC TATCTCGTGA TCGGCCTGCA CATCGCGGCG
ACGCTCTGGC ACGCGTTCAT CGTCAAGGAC GAGACACTGG CCCGGATGTG GCCGCGGCGG
TGA
 
Protein sequence
MTETNKAYDP LLRWIHWVTA VLFIAAMLIG LYCGLQPAGT SPRRELLEIH KSLGITLFLL 
TLLRVVVRSR TTAPPAPATF GPLVRALSQL NHWALYALLL IMPVTGYMFS SAGGYSLRYF
WTFSWPRLFA GDKAIAHAGE IAHDTLAYLV YLVIGLHIAA TLWHAFIVKD ETLARMWPRR