| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5326 |
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| Symbol | livF |
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| ID | 5155351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5553982 |
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| End bp | 5554713 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560088 |
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| Product | high-affinity branched-chain amino acid ABC transporter ATP-binding protein |
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| Protein accession | YP_001241212 |
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| Protein GI | 148256627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.740565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.577425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGCGT CCCTGCTCCA GATTCGCAAT CTGCGTGCTT CCTACGGCAA GATCGAAGCG
CTCAAGGGCG TCGATCTCGA CATCAAGGCC GGGGAAATCG TCGCGCTGAT CGGCGCCAAC
GGCGCCGGCA AATCGACCTT GATGATGTCG ATCTTCGGCC GGCCGCGCGC CAGCTCCGGA
CACATCGTCT ATGATGGCAG CGACATCACG CAGGTGCCGA CGCATCAGAT CGCCCGGCTC
AGAATCGCGC AATCGCCGGA GGGCCGCCGC ATCTTCCCGC GCATGAGCGT TGCGGAAAAT
CTGCAGATGG GCGCGGACGC CGGCGCCACC ACCGAAGCGC AGCGCGCCGA GACGCTGGAT
CGCGTGTTCG CGCTGTTCCC GCGGTTGAAG GAGCGTTTCG AGCAGCGCGG CGGCACGCTG
TCCGGCGGCG AGCAGCAGAT GCTGGCGATC GGGCGGGCCC TGATGAGCCG GCCGCGGCTC
CTGCTGCTCG ACGAGCCCTC GCTCGGGCTC GCGCCGCTGA TCGCGCGACA GATTTTTGAC
GCCATTCGGA CGCTCAATCG GCAGGATGGA TTGACGGTGC TGATCGTCGA GCAGAACGCC
AATCACGCGC TGAAGCTCGC CCATCGCGGC TATGTGCTGG TCAACGGACT GATCACGCTG
TCGGGCAGCG GCGCCGAGCT GCTGCAGCGC CCGGAGATCC GCGCCGCCTA TCTCGAGGGC
GGCCGCCACT GA
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| Protein sequence | MSASLLQIRN LRASYGKIEA LKGVDLDIKA GEIVALIGAN GAGKSTLMMS IFGRPRASSG
HIVYDGSDIT QVPTHQIARL RIAQSPEGRR IFPRMSVAEN LQMGADAGAT TEAQRAETLD
RVFALFPRLK ERFEQRGGTL SGGEQQMLAI GRALMSRPRL LLLDEPSLGL APLIARQIFD
AIRTLNRQDG LTVLIVEQNA NHALKLAHRG YVLVNGLITL SGSGAELLQR PEIRAAYLEG
GRH
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