Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5323 |
Symbol | livH |
ID | 5149346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5550884 |
End bp | 5551801 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640560085 |
Product | high-affinity branched-chain amino acid ABC transporter (permease protein) |
Protein accession | YP_001241209 |
Protein GI | 148256624 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.446123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTATT TCGCCCAGCA GCTCATCAAC GGCCTCGTCC TCGGCTCGAT CTACGGCCTG ATCGCCATCG GCTACACCAT GGTTTACGGC ATCGTCGGCA TGATCAATTT CGCCCATGGC GACGTGTTCA TGATCGGCGG CTTCATCGCG CTGATCTCGT TCCTGGTCCT GGTGTCGGTC GGGCTCACCG CAGTGCCGGT CATTCTGCTG ATCGTGCTGC TGGTCTCGAT GGCGATCACC GCGCTCTATG GCTGGACCAT CGAGCGCATC GCCTATCGTC CGCTGCGCCA CTCCTTCCGG CTGGCGCCGA TGCTGTCGGC GATCGGCATG TCGTTCGTGT TGACGAATTT CTCGCAGGTG TCGCAGGGCG CGCGCGTCAA GCCGGTCCCG CCGATCGTCA CAGGCGGCTA CACGCTGCAC GAGGGCGAGA GCGGCTTTGT CGTCCAGCTG TCCAACATCC AGATCGTCGT GGTGATCACT ACGATCGTGC TGCTCGGCCT GTTCACCTGG CTGGTGTCGC GCACCCGGCT CGGCCGCGAC ATGCGCGCCT GCGAGCAGGA CCAGACGATG GCGGCACTGC TCGGCGTCGA CGTCGACCGC ACCATCTCGA TGACCTTCGT GATCGGTGCG GCGCTCGCCG CCGTCGCCGG CATGATGTAC CTGTTATATT ATGGCCTGGT CGATTTCTTC ATGGGCTTCG TCGCCGGCAT CAAGGCCTTC ACAGCCGCCG TGCTCGGCGG CATCGGCTCG CTGCCCGGCG CGATGCTCGG TGGTCTCGCG ATCGGCCTGA TCGAGACGTT CTGGTCGGCC TATTTCTCGG TCGAGTACAA GGACGTGGCG GCGTTCTCGA TCCTCATCGT GGTGCTGATC TTCATGCCGA CCGGCCTCTT GGGCCGTCCC GAAGTCGAAA AAGTCTGA
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Protein sequence | MDYFAQQLIN GLVLGSIYGL IAIGYTMVYG IVGMINFAHG DVFMIGGFIA LISFLVLVSV GLTAVPVILL IVLLVSMAIT ALYGWTIERI AYRPLRHSFR LAPMLSAIGM SFVLTNFSQV SQGARVKPVP PIVTGGYTLH EGESGFVVQL SNIQIVVVIT TIVLLGLFTW LVSRTRLGRD MRACEQDQTM AALLGVDVDR TISMTFVIGA ALAAVAGMMY LLYYGLVDFF MGFVAGIKAF TAAVLGGIGS LPGAMLGGLA IGLIETFWSA YFSVEYKDVA AFSILIVVLI FMPTGLLGRP EVEKV
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