Gene BBta_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5300 
Symbol 
ID5155878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5530263 
End bp5530763 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID640560064 
Producthypothetical protein 
Protein accessionYP_001241188 
Protein GI148256603 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0118609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCA AGGCCAAGGC TGCGACCAGG ACGGCGACCA AGAGCGCGAC CAAAACTCTC 
TTCACGATCG GCTATGAGCA CACCCCCGCC AAGGCCGTGC TCGACGAGTT GCAGGCGGCC
GGCGTCAAGC TGCTGGTCGA TGTGCGCGCG GTGGCGGCGT CGCGCCGGCC GGGCTTCTCC
AAGAGCCAAC TGGCCGCGGG GCTCGACGAG CGCGGCATCG CCTATGTCCA TCTGCGCAGG
CTCGGCACGC CGAAGGAAGG CCGCGAGGCC GCCCGCAGCG GCCAATACGA CACGCTGCAC
AAGATCTACA GCGCGCATCT GAAGACGCCA CAGGCCAGGG AGCAGATGGA CGAGCTGGCC
GCGCTTGTGA AGAGCGCGGG CCCGGTGTGC CTGCTGTGCT ATGAGCGCGA CCATGCCCAT
TGCCACCGGC AATGGATTGC GGAGATCATC GAGGACCGCG ATCAGGTCCG GGTCGAGAAT
CTGGTCGCGC CGCAGGTTTG A
 
Protein sequence
MMTKAKAATR TATKSATKTL FTIGYEHTPA KAVLDELQAA GVKLLVDVRA VAASRRPGFS 
KSQLAAGLDE RGIAYVHLRR LGTPKEGREA ARSGQYDTLH KIYSAHLKTP QAREQMDELA
ALVKSAGPVC LLCYERDHAH CHRQWIAEII EDRDQVRVEN LVAPQV