Gene BBta_5263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5263 
Symbol 
ID5155311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5492110 
End bp5493087 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID640560032 
Productputative oxidoreductase 
Protein accessionYP_001241156 
Protein GI148256571 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.333673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.305573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGG CGATCGTCTG TCGCGAGCTC GGGCCACCGG AGGCGTTGCG GCTCGAAGAT 
CTGCCGCCGC GCGCGCCAGG TGAGGGAGAG GTGCGGGTGA AGATCCGCGC CGCCGGCATC
AACTTTCCGG ACATTCTGAT GGCGGCGGGC GAGTATCAGC TCAAGCCCGA GCTGCCGTTC
ACGCCGGGCG TGGAAGCGGC CGGCGATGTC ATCGAGACCG GCACCGCTGT GACGGGGCGT
TCCGTCGGCG ACCGTGTCAT CGTGCGCATG CGCTTCGGCG CCTATGCAGA AGAGGCGGTG
GTCGCAGCCC GCCAGCTCAC GCCGCTGCCC TCGACCTTCG ACTACGCTGA AGGCGCGACC
TATCTCGCCG GCCACGGCAC CGCGTATCAT GCGCTGGTCG ATCGCGGCCA GCTCAGGTCC
GGCGAGACGC TGCTGGTGCA CGGCGCCGGT GGCGGCGTCG GCCTGGCCGC GGTCGAGCTC
GGCAAGCTGC TGGGCGCCAC CGTCATCGCG GCGGCCTCGT CCGAAGAGAA GCTCGCGGTG
GCCCGCGCGC GCGGCGCCGA TCATCTCGTG CTGTATGCGC GCGAGCCGTT TCGCGATGCG
GTCAAGCGCA TCACCGATGG CCGAGGCGTC GATGTCGTGT TCGATCCTGT CGGTGGCGAG
GTGTTCGAAA ACAGCGTCCG CTGCATCGCC TGGGGCGCGC GGCTGCTGGT GATCGGCTTC
ACCGGCGGCA TCGGGCTGGC CCGCACCAAT CTGATTTTGA TGAAGGGCGC CAGCGTCCTC
GGCGTCCGCG CGGGCGAGGC CGTGCGCCAG GATCCCGCGC TCGGCGAGCG CCGCATGGCC
GCGTTGCTCG ATTTTGCGGA GCAGGGCAGA CTGCGCCCCA ATGTCTCACA CCGCGTACCG
TTTGCGGATT ATGCGCGCGC GATGCGACTG CTGATCAACC GCAAGGCCAT CGGCCGCGTC
GCGCTGGTGA TGGATTGA
 
Protein sequence
MPRAIVCREL GPPEALRLED LPPRAPGEGE VRVKIRAAGI NFPDILMAAG EYQLKPELPF 
TPGVEAAGDV IETGTAVTGR SVGDRVIVRM RFGAYAEEAV VAARQLTPLP STFDYAEGAT
YLAGHGTAYH ALVDRGQLRS GETLLVHGAG GGVGLAAVEL GKLLGATVIA AASSEEKLAV
ARARGADHLV LYAREPFRDA VKRITDGRGV DVVFDPVGGE VFENSVRCIA WGARLLVIGF
TGGIGLARTN LILMKGASVL GVRAGEAVRQ DPALGERRMA ALLDFAEQGR LRPNVSHRVP
FADYARAMRL LINRKAIGRV ALVMD